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5B1S

Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 2-(2-fluorophenyl)ethanamine

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004766molecular_functionspermidine synthase activity
A0006596biological_processpolyamine biosynthetic process
A0016740molecular_functiontransferase activity
B0003824molecular_functioncatalytic activity
B0004766molecular_functionspermidine synthase activity
B0006596biological_processpolyamine biosynthetic process
B0016740molecular_functiontransferase activity
C0003824molecular_functioncatalytic activity
C0004766molecular_functionspermidine synthase activity
C0006596biological_processpolyamine biosynthetic process
C0016740molecular_functiontransferase activity
D0003824molecular_functioncatalytic activity
D0004766molecular_functionspermidine synthase activity
D0006596biological_processpolyamine biosynthetic process
D0016740molecular_functiontransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue S4M A 501
ChainResidue
AGLN40
AVAL123
AASP149
AGLY150
AASP168
ATHR169
ATHR170
APRO175
AALA176
ALEU179
ATYR237
ALEU59
ABSX502
AGLN64
AHIS74
AGLY95
AASP98
AASP118
AILE119
AASP120

site_idAC2
Number of Residues13
Detailsbinding site for residue BSX A 502
ChainResidue
ATRP19
AGLN64
ATYR73
ATHR169
ATHR170
AASP171
AGLN201
ATYR237
APRO238
AS4M501
AHOH618
AHOH626
AHOH689

site_idAC3
Number of Residues23
Detailsbinding site for residue S4M B 501
ChainResidue
BGLN40
BMET57
BLEU59
BGLN64
BTYR73
BHIS74
BGLY95
BASP98
BVAL117
BASP118
BILE119
BASP120
BVAL123
BASP149
BGLY150
BASP168
BTHR169
BTHR170
BPRO175
BALA176
BLEU179
BTYR237
BBSX502

site_idAC4
Number of Residues13
Detailsbinding site for residue BSX B 502
ChainResidue
BTRP19
BGLN64
BTYR73
BTHR169
BTHR170
BASP171
BGLN201
BTYR237
BPRO238
BS4M501
BHOH633
BHOH660
BHOH681

site_idAC5
Number of Residues21
Detailsbinding site for residue S4M C 501
ChainResidue
CGLN40
CLEU59
CGLN64
CHIS74
CGLY95
CASP98
CASP118
CILE119
CASP120
CVAL123
CASP149
CGLY150
CASP168
CTHR169
CTHR170
CPRO175
CALA176
CLEU179
CTYR237
CBSX502
CHOH626

site_idAC6
Number of Residues14
Detailsbinding site for residue BSX C 502
ChainResidue
CPRO238
CS4M501
CHOH619
CHOH625
CHOH679
CTRP19
CGLN64
CTYR73
CASP168
CTHR169
CTHR170
CASP171
CGLN201
CTYR237

site_idAC7
Number of Residues22
Detailsbinding site for residue S4M D 501
ChainResidue
DGLN40
DLEU59
DGLN64
DTYR73
DHIS74
DGLY95
DASP98
DVAL117
DASP118
DILE119
DASP120
DVAL123
DASP149
DGLY150
DASP168
DTHR169
DTHR170
DPRO175
DALA176
DLEU179
DTYR237
DBSX502

site_idAC8
Number of Residues13
Detailsbinding site for residue BSX D 502
ChainResidue
DTRP19
DGLN64
DTYR73
DTHR169
DTHR170
DASP171
DGLN201
DTYR237
DPRO238
DS4M501
DHOH614
DHOH637
DHOH664

Functional Information from PROSITE/UniProt
site_idPS01330
Number of Residues14
DetailsPABS_1 Polyamine biosynthesis (PABS) domain signature. VLIIGGGdGgvLrE
ChainResidueDetails
AVAL91-GLU104

219869

PDB entries from 2024-05-15

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