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5AXW

Crystal structure of Staphylococcus aureus Cas9 in complex with sgRNA and target DNA (TTGGGT PAM)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0004519molecular_functionendonuclease activity
A0043571biological_processmaintenance of CRISPR repeat elements
A0046872molecular_functionmetal ion binding
A0051607biological_processdefense response to virus
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue NA A 1101
ChainResidue
ATYR389
ATHR390
AHOH1213
AHOH1219
AHOH1239
AHOH1252

site_idAC2
Number of Residues4
Detailsbinding site for residue NA A 1102
ChainResidue
AILE599
ALEU592
ASER594
ASER597

site_idAC3
Number of Residues4
Detailsbinding site for residue NA A 1103
ChainResidue
AGLU231
AMET232
AMET234
AHIS236

site_idAC4
Number of Residues5
Detailsbinding site for residue NA B 101
ChainResidue
BU11
BG12
BHOH215
BHOH216
CHOH101

site_idAC5
Number of Residues1
Detailsbinding site for residue PO4 B 102
ChainResidue
BG70

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO B 103
ChainResidue
BG21
BU22
CDG9

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO D 101
ChainResidue
AASN885
CDC6
DDG3
DDG4
DDG5

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: For RuvC-like nuclease domain => ECO:0000305|PubMed:26317473
ChainResidueDetails
AASP10

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton acceptor for HNH nuclease domain => ECO:0000305|PubMed:26317473
ChainResidueDetails
AHIS557

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01480
ChainResidueDetails
AASP10
AGLU477
AGLU481
AHIS701

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:26317473
ChainResidueDetails
ATYR789

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PDB entries from 2024-07-17

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