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4YC9

Crystal structure of TRIM24 PHD-bromodomain complexed with N-(6-{3-[4-(dimethylamino)butoxy]-5-propoxyphenoxy}-1,3-dimethyl-2-oxo-2,3-dihydro-1H-1,3-benzodiazol-5-yl)-3,4-dimethoxybenzene-1-sulfonamide (8i)

Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 1101
ChainResidue
ACYS829
ACYS832
AHIS849
ACYS852

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1102
ChainResidue
ACYS841
ACYS844
ACYS867
ACYS870

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL A 1103
ChainResidue
APHE869
APHE914
AHOH1220
AHOH1240
ALYS846

site_idAC4
Number of Residues12
Detailsbinding site for residue 4C1 A 1104
ChainResidue
ALEU922
AALA923
APHE924
AGLN925
AASP926
AVAL928
APHE979
AASN980
AHOH1293
AHOH1391
AHOH1396
AHOH1404

Functional Information from PROSITE/UniProt
site_idPS00633
Number of Residues62
DetailsBROMODOMAIN_1 Bromodomain signature. HemSlafqDpvpltvpDYYkiIknpMdlstIkkrlqedysmYskpedfvadfrl.IfqNCaeF
ChainResidueDetails
AHIS918-PHE979

site_idPS01359
Number of Residues42
DetailsZF_PHD_1 Zinc finger PHD-type signature. CavCqnggel.......................................LcCek..Cpkv.FHlsChvptltnfpsge.................................WiCtfC
ChainResidueDetails
ACYS829-CYS870

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues47
DetailsZN_FING: PHD-type => ECO:0000255|PROSITE-ProRule:PRU00146
ChainResidueDetails
AGLU826-LEU873

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Interaction with histone H3 that is not methylated at 'Lys-4' (H3K4me0)
ChainResidueDetails
AASP827

site_idSWS_FT_FI3
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS875
ALYS992

site_idSWS_FT_FI4
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447
ChainResidueDetails
ALYS949

224201

PDB entries from 2024-08-28

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