4XMN

Structure of the yeast coat nucleoporin complex, space group P212121

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005198	molecular_function	structural molecule activity
A	0005515	molecular_function	protein binding
A	0005635	cellular_component	nuclear envelope
A	0005643	cellular_component	nuclear pore
A	0005774	cellular_component	vacuolar membrane
A	0005783	cellular_component	endoplasmic reticulum
A	0005789	cellular_component	endoplasmic reticulum membrane
A	0006606	biological_process	protein import into nucleus
A	0006913	biological_process	nucleocytoplasmic transport
A	0012507	cellular_component	ER to Golgi transport vesicle membrane
A	0015031	biological_process	protein transport
A	0016192	biological_process	vesicle-mediated transport
A	0030127	cellular_component	COPII vesicle coat
A	0031080	cellular_component	nuclear pore outer ring
A	0031410	cellular_component	cytoplasmic vesicle
A	0032008	biological_process	positive regulation of TOR signaling
A	0032527	biological_process	protein exit from endoplasmic reticulum
A	0035859	cellular_component	Seh1-associated complex
A	0036503	biological_process	ERAD pathway
A	0045893	biological_process	positive regulation of DNA-templated transcription
A	0051028	biological_process	mRNA transport
A	0051664	biological_process	nuclear pore localization
A	0070863	biological_process	positive regulation of protein exit from endoplasmic reticulum
A	0071944	cellular_component	cell periphery
A	0090114	biological_process	COPII-coated vesicle budding
A	1902953	biological_process	positive regulation of ER to Golgi vesicle-mediated transport
A	1903432	biological_process	regulation of TORC1 signaling
A	1904263	biological_process	positive regulation of TORC1 signaling
D	0000055	biological_process	ribosomal large subunit export from nucleus
D	0005515	molecular_function	protein binding
D	0005635	cellular_component	nuclear envelope
D	0005643	cellular_component	nuclear pore
D	0006406	biological_process	mRNA export from nucleus
D	0006606	biological_process	protein import into nucleus
D	0006913	biological_process	nucleocytoplasmic transport
D	0015031	biological_process	protein transport
D	0017056	molecular_function	structural constituent of nuclear pore
D	0031080	cellular_component	nuclear pore outer ring
D	0031965	cellular_component	nuclear membrane
D	0045893	biological_process	positive regulation of DNA-templated transcription
D	0051028	biological_process	mRNA transport
D	0051664	biological_process	nuclear pore localization
E	0000055	biological_process	ribosomal large subunit export from nucleus
E	0000122	biological_process	negative regulation of transcription by RNA polymerase II
E	0000781	cellular_component	chromosome, telomeric region
E	0000973	biological_process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
E	0005515	molecular_function	protein binding
E	0005635	cellular_component	nuclear envelope
E	0005643	cellular_component	nuclear pore
E	0006302	biological_process	double-strand break repair
E	0006406	biological_process	mRNA export from nucleus
E	0006606	biological_process	protein import into nucleus
E	0006611	biological_process	protein export from nucleus
E	0006913	biological_process	nucleocytoplasmic transport
E	0015031	biological_process	protein transport
E	0017056	molecular_function	structural constituent of nuclear pore
E	0031080	cellular_component	nuclear pore outer ring
E	0031509	biological_process	subtelomeric heterochromatin formation
E	0031965	cellular_component	nuclear membrane
E	0031990	biological_process	mRNA export from nucleus in response to heat stress
E	0034398	biological_process	telomere tethering at nuclear periphery
E	0042802	molecular_function	identical protein binding
E	0045893	biological_process	positive regulation of DNA-templated transcription
E	0045944	biological_process	positive regulation of transcription by RNA polymerase II
E	0051028	biological_process	mRNA transport
E	0051664	biological_process	nuclear pore localization
F	0005643	cellular_component	nuclear pore
F	0017056	molecular_function	structural constituent of nuclear pore

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH

Chain	Residue	Details
L	TYR195-HIS201
H	TYR231-HIS237

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	39
Details	Repeat: {"description":"WD 1"}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	41
Details	Repeat: {"description":"WD 2"}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	41
Details	Repeat: {"description":"WD 3"}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	42
Details	Repeat: {"description":"WD 5"}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	1
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	21
Details	Region: {"description":"Leucine-zipper 1","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	1
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---