4WQ4

E. coli YgjD(E12A)-YeaZ heterodimer in complex with ATP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000287	molecular_function	magnesium ion binding
A	0000408	cellular_component	EKC/KEOPS complex
A	0002949	biological_process	tRNA threonylcarbamoyladenosine modification
A	0005506	molecular_function	iron ion binding
A	0005515	molecular_function	protein binding
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0006400	biological_process	tRNA modification
A	0008033	biological_process	tRNA processing
A	0016746	molecular_function	acyltransferase activity
A	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
A	0042802	molecular_function	identical protein binding
A	0046872	molecular_function	metal ion binding
A	0061711	molecular_function	N(6)-L-threonylcarbamoyladenine synthase activity
A	0070525	biological_process	tRNA threonylcarbamoyladenosine metabolic process
A	0140032	molecular_function	glycosylation-dependent protein binding
A	1990145	biological_process	maintenance of translational fidelity
B	0000287	molecular_function	magnesium ion binding
B	0000408	cellular_component	EKC/KEOPS complex
B	0002949	biological_process	tRNA threonylcarbamoyladenosine modification
B	0005506	molecular_function	iron ion binding
B	0005515	molecular_function	protein binding
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0006400	biological_process	tRNA modification
B	0008033	biological_process	tRNA processing
B	0016746	molecular_function	acyltransferase activity
B	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
B	0042802	molecular_function	identical protein binding
B	0046872	molecular_function	metal ion binding
B	0061711	molecular_function	N(6)-L-threonylcarbamoyladenine synthase activity
B	0070525	biological_process	tRNA threonylcarbamoyladenosine metabolic process
B	0140032	molecular_function	glycosylation-dependent protein binding
B	1990145	biological_process	maintenance of translational fidelity
C	0000408	cellular_component	EKC/KEOPS complex
C	0002949	biological_process	tRNA threonylcarbamoyladenosine modification
C	0005515	molecular_function	protein binding
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0008033	biological_process	tRNA processing
C	0008237	molecular_function	metallopeptidase activity
C	0042802	molecular_function	identical protein binding
C	1990145	biological_process	maintenance of translational fidelity
D	0000408	cellular_component	EKC/KEOPS complex
D	0002949	biological_process	tRNA threonylcarbamoyladenosine modification
D	0005515	molecular_function	protein binding
D	0005737	cellular_component	cytoplasm
D	0005829	cellular_component	cytosol
D	0008033	biological_process	tRNA processing
D	0008237	molecular_function	metallopeptidase activity
D	0042802	molecular_function	identical protein binding
D	1990145	biological_process	maintenance of translational fidelity

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue FE A 401

Chain	Residue
A	HIS111
A	HIS115
A	ASP300
A	ATP402

---

site_id	AC2
Number of Residues	20
Details	binding site for residue ATP A 402

Chain	Residue
A	GLY138
A	HIS139
A	GLY163
A	ASP167
A	GLY180
A	PRO181
A	GLY268
A	VAL269
A	ASN272
A	ASP300
A	FE401
A	HOH536
A	HOH538
A	HOH572
A	HOH591
A	HIS111
A	MET112
A	HIS115
A	SER136
A	GLY137

---

site_id	AC3
Number of Residues	1
Details	binding site for residue ACT A 403

Chain	Residue
A	VAL85

---

site_id	AC4
Number of Residues	5
Details	binding site for residue FE B 401

Chain	Residue
B	HIS111
B	HIS115
B	ASP300
B	ATP402
B	HOH527

---

site_id	AC5
Number of Residues	17
Details	binding site for residue ATP B 402

Chain	Residue
B	MET112
B	HIS115
B	SER136
B	GLY137
B	GLY138
B	HIS139
B	GLY163
B	PHE166
B	ASP167
B	GLY180
B	PRO181
B	GLY268
B	VAL269
B	ASN272
B	ASP300
B	FE401
B	HOH527

---

site_id	AC6
Number of Residues	3
Details	binding site for residue ACT B 403

Chain	Residue
B	ARG49
B	ASP50
B	ARG53

---

site_id	AC7
Number of Residues	9
Details	binding site for residue GOL C 301

Chain	Residue
C	ARG32
C	GLU33
C	HIS34
C	SER67
C	THR69
C	ILE73
C	PEG302
C	HOH425
C	HOH440

---

site_id	AC8
Number of Residues	4
Details	binding site for residue PEG C 302

Chain	Residue
C	SER67
C	PHE68
C	GOL301
C	HOH463

---

site_id	AC9
Number of Residues	4
Details	binding site for residue PEG D 301

Chain	Residue
D	ARG32
D	GLU33
D	HIS34
D	THR35

---

Functional Information from PROSITE/UniProt

site_id	PS01016
Number of Residues	21
Details	GLYCOPROTEASE Glycoprotease family signature. RSlafaWDvPaIpvhHmeGHL

Chain	Residue	Details
A	ARG96-LEU116

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	14
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01445

Chain	Residue	Details
A	HIS111
B	LEU134
B	ASP167
B	GLY180
B	ASN272
B	ASP300
A	HIS115
A	LEU134
A	ASP167
A	GLY180
A	ASN272
A	ASP300
B	HIS111
B	HIS115

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