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4W7S

Crystal structure of the yeast DEAD-box splicing factor Prp28 at 2.54 Angstroms resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0005524molecular_functionATP binding
B0003676molecular_functionnucleic acid binding
B0005524molecular_functionATP binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue P6G A 601
ChainResidue
AVAL161
ALYS163
AGLU386
ATYR398
ATHR400
AHOH814

site_idAC2
Number of Residues4
Detailsbinding site for residue P6G A 603
ChainResidue
AHOH817
AGLN412
ALYS434
ATYR435

site_idAC3
Number of Residues6
Detailsbinding site for residue P6G A 604
ChainResidue
ATYR158
AARG172
AASN173
ASER196
AARG202
AHOH732

site_idAC4
Number of Residues6
Detailsbinding site for residue P6G A 605
ChainResidue
AASP353
AASN357
BILE347
BLEU349
BVAL384
BHOH770

site_idAC5
Number of Residues3
Detailsbinding site for residue GOL A 606
ChainResidue
ASER308
AGLU309
BGLU156

site_idAC6
Number of Residues24
Detailsbinding site for residue ANP B 601
ChainResidue
AGLU284
AASN286
BTRP174
BPHE194
BSER196
BPRO197
BTHR198
BGLN201
BGLY224
BSER225
BGLY226
BGLN269
BGLU273
BLYS276
BMG605
BHOH701
BHOH704
BHOH709
BHOH711
BHOH717
BHOH729
BHOH742
BHOH800
BHOH801

site_idAC7
Number of Residues6
Detailsbinding site for residue P6G B 602
ChainResidue
BVAL161
BLYS163
BMSE381
BGLU386
BTYR398
BTHR400

site_idAC8
Number of Residues6
Detailsbinding site for residue P6G B 603
ChainResidue
BASN147
BGLU148
BARG149
BARG149
BARG152
BHOH703

site_idAC9
Number of Residues6
Detailsbinding site for residue P6G B 604
ChainResidue
APRO244
BTHR139
BARG172
BASN173
BHOH721
BHOH791

site_idAD1
Number of Residues4
Detailsbinding site for residue MG B 605
ChainResidue
BANP601
BHOH701
BHOH704
BHOH800

site_idAD2
Number of Residues5
Detailsbinding site for residue MG B 606
ChainResidue
AHOH829
AHOH830
AHOH837
BHOH795
BHOH803

Functional Information from PROSITE/UniProt
site_idPS00039
Number of Residues9
DetailsDEAD_ATP_HELICASE DEAD-box subfamily ATP-dependent helicases signature. VLDEADKmI
ChainResidueDetails
AVAL339-ILE347

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00541
ChainResidueDetails
AALA221
BALA221

225158

PDB entries from 2024-09-18

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