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4U4X

Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM37 at 1.56 A resolution.

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 3C2 A 801
ChainResidue
AILE481
BMET496
BSER497
BSER754
B3C2801
APRO494
ASER497
ASER729
ALYS730
AGLY731
BLYS493
BPRO494
BPHE495

site_idAC2
Number of Residues9
Detailsbinding site for residue SO4 A 802
ChainResidue
ASER652
ALYS656
AARG660
AGOL808
AHOH1003
AHOH1018
AHOH1147
AHOH1170
AHOH1172

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 A 803
ChainResidue
AGLU486
AASP490
APHE491
AHOH1132
BLYS493
BHOH1053

site_idAC4
Number of Residues13
Detailsbinding site for residue GLU A 804
ChainResidue
ATYR450
APRO478
ALEU479
ATHR480
AARG485
AGLY653
ASER654
ATHR655
AGLU705
ATYR732
AHOH977
AHOH978
AHOH988

site_idAC5
Number of Residues4
Detailsbinding site for residue ACT A 805
ChainResidue
AASP760
BASN726
BASP728
BSER729

site_idAC6
Number of Residues6
Detailsbinding site for residue GOL A 806
ChainResidue
AARG660
ATRP671
AARG675
AGOL808
AHOH940
AHOH943

site_idAC7
Number of Residues2
Detailsbinding site for residue GOL A 807
ChainResidue
ALYS393
ATHR394

site_idAC8
Number of Residues5
Detailsbinding site for residue GOL A 808
ChainResidue
ALYS656
AARG675
ASO4802
AGOL806
AHOH1205

site_idAC9
Number of Residues4
Detailsbinding site for residue PEG A 809
ChainResidue
AGLU416
AGLY417
AARG420
ALYS441

site_idAD1
Number of Residues7
Detailsbinding site for residue PEG A 810
ChainResidue
ATYR469
AGLY470
ALYS471
ALYS505
APRO717
AASP719
AHOH902

site_idAD2
Number of Residues12
Detailsbinding site for residue 3C2 B 801
ChainResidue
ALYS493
APRO494
APHE495
AMET496
ASER497
ASER754
A3C2801
BPRO494
BSER497
BSER729
BLYS730
BGLY731

site_idAD3
Number of Residues8
Detailsbinding site for residue SO4 B 802
ChainResidue
BALA452
BSER652
BLYS656
BARG660
BHOH1032
BHOH1033
BHOH1123
BHOH1124

site_idAD4
Number of Residues6
Detailsbinding site for residue SO4 B 803
ChainResidue
ALYS695
BARG420
BHOH911
BHOH918
BHOH919
BHOH991

site_idAD5
Number of Residues7
Detailsbinding site for residue SO4 B 804
ChainResidue
BPHE491
BHOH1081
BHOH1100
ALYS493
AHOH1080
BGLU486
BASP490

site_idAD6
Number of Residues13
Detailsbinding site for residue GLU B 805
ChainResidue
BTYR450
BPRO478
BLEU479
BTHR480
BARG485
BGLY653
BSER654
BTHR655
BGLU705
BTYR732
BHOH967
BHOH981
BHOH992

site_idAD7
Number of Residues5
Detailsbinding site for residue ACT B 806
ChainResidue
AASN726
ALEU727
AASP728
ASER729
BASP760

site_idAD8
Number of Residues4
Detailsbinding site for residue ACT B 807
ChainResidue
BARG660
BTRP671
BARG675
BHOH1166

site_idAD9
Number of Residues4
Detailsbinding site for residue ACT B 808
ChainResidue
ATYR483
BHIS435
BALA749
BHOH1029

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11086992","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16483599","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1FTJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2CMO","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsSite: {"description":"Interaction with the cone snail toxin Con-ikot-ikot","evidences":[{"source":"PubMed","id":"25103405","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Crucial to convey clamshell closure to channel opening","evidences":[{"source":"PubMed","id":"25103405","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by PKC","evidences":[{"source":"PubMed","id":"8848293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by PKG","evidences":[{"source":"PubMed","id":"8848293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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