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4S26

Crystal structure of Arabidopsis thaliana ThiC with bound imidazole ribonucleotide, S-adenosylhomocysteine, Fe4S4 cluster and Zn (monoclinic crystal form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0009228biological_processthiamine biosynthetic process
A0016830molecular_functioncarbon-carbon lyase activity
A0051536molecular_functioniron-sulfur cluster binding
B0009228biological_processthiamine biosynthetic process
B0016830molecular_functioncarbon-carbon lyase activity
B0051536molecular_functioniron-sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SF4 A 701
ChainResidue
ACYS570
AMET572
ACYS573
ACYS578
ASER579
AMET580
BCL701
BSAH704

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE IRN A 702
ChainResidue
AMET257
ALEU259
ATYR286
ATHR320
AHIS322
ASER342
AARG343
AGLY344
AASP383
AARG386
AGLU422
AGLY423
ATYR449
ALEU451
ASAH703
AHOH919
AASN228

site_idAC3
Number of Residues23
DetailsBINDING SITE FOR RESIDUE SAH A 703
ChainResidue
AASN228
AILE229
AGLY230
ALEU259
AVAL341
AARG343
AARG386
AHIS426
AGLU489
AHIS490
ALEU493
APRO494
AIRN702
AZN704
AHOH961
AHOH1006
AHOH1007
AHOH1008
AHOH1051
AHOH1065
BMET572
BCYS573
BSF4702

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 704
ChainResidue
AHIS426
AHIS490
ASAH703
AHOH961
AHOH962

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 705
ChainResidue
AHIS490
AHOH963
BSF4702

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 701
ChainResidue
AMET580
ASF4701
BHIS490
BHOH1066

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SF4 B 702
ChainResidue
ASAH703
ACL705
BCYS570
BMET572
BCYS573
BCYS578
BSER579

site_idAC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE IRN B 703
ChainResidue
BASN228
BMET257
BLEU259
BTYR286
BTHR320
BHIS322
BSER342
BARG343
BGLY344
BASP383
BARG386
BGLU422
BGLY423
BTYR449
BLEU451
BSAH704

site_idAC9
Number of Residues24
DetailsBINDING SITE FOR RESIDUE SAH B 704
ChainResidue
BIRN703
BZN705
BHOH1008
BHOH1045
BHOH1054
BHOH1056
BHOH1057
BHOH1064
AMET572
ACYS573
ASF4701
BASN228
BILE229
BGLY230
BLEU259
BVAL341
BARG343
BARG386
BHIS426
BLEU451
BGLU489
BHIS490
BLEU493
BPRO494

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 705
ChainResidue
BHIS426
BHIS490
BSAH704
BHOH1064
BHOH1065

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues22
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q9A6Q5
ChainResidueDetails
AASN228
ACYS573
ACYS578
BASN228
BMET257
BTYR286
BHIS322
BSER342
BASP383
BGLU422
BTYR449
AMET257
BCYS570
BCYS573
BCYS578
ATYR286
AHIS322
ASER342
AASP383
AGLU422
ATYR449
ACYS570

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305|PubMed:24161603
ChainResidueDetails
AHIS426
AHIS490
BHIS426
BHIS490

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PDB entries from 2024-07-24

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