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4S0Z

Crystal structure of M26V human DJ-1

Functional Information from GO Data
ChainGOidnamespacecontents
A0000785cellular_componentchromatin
A0001046molecular_functioncore promoter sequence-specific DNA binding
A0001933biological_processnegative regulation of protein phosphorylation
A0001963biological_processsynaptic transmission, dopaminergic
A0002866biological_processpositive regulation of acute inflammatory response to antigenic stimulus
A0003690molecular_functiondouble-stranded DNA binding
A0003697molecular_functionsingle-stranded DNA binding
A0003713molecular_functiontranscription coactivator activity
A0003723molecular_functionRNA binding
A0003729molecular_functionmRNA binding
A0005102molecular_functionsignaling receptor binding
A0005507molecular_functioncopper ion binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005758cellular_componentmitochondrial intermembrane space
A0005759cellular_componentmitochondrial matrix
A0005783cellular_componentendoplasmic reticulum
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0005912cellular_componentadherens junction
A0006281biological_processDNA repair
A0006469biological_processnegative regulation of protein kinase activity
A0006508biological_processproteolysis
A0006517biological_processprotein deglycosylation
A0006914biological_processautophagy
A0006954biological_processinflammatory response
A0006974biological_processDNA damage response
A0006979biological_processresponse to oxidative stress
A0007005biological_processmitochondrion organization
A0007265biological_processRas protein signal transduction
A0007338biological_processsingle fertilization
A0008233molecular_functionpeptidase activity
A0008344biological_processadult locomotory behavior
A0009438biological_processmethylglyoxal metabolic process
A0010273biological_processdetoxification of copper ion
A0010628biological_processpositive regulation of gene expression
A0010629biological_processnegative regulation of gene expression
A0016020cellular_componentmembrane
A0016532molecular_functionsuperoxide dismutase copper chaperone activity
A0016605cellular_componentPML body
A0016684molecular_functionoxidoreductase activity, acting on peroxide as acceptor
A0016787molecular_functionhydrolase activity
A0019249biological_processlactate biosynthetic process
A0019826molecular_functionoxygen sensor activity
A0019899molecular_functionenzyme binding
A0019900molecular_functionkinase binding
A0019955molecular_functioncytokine binding
A0030073biological_processinsulin secretion
A0030424cellular_componentaxon
A0031334biological_processpositive regulation of protein-containing complex assembly
A0031397biological_processnegative regulation of protein ubiquitination
A0032091biological_processnegative regulation of protein binding
A0032148biological_processactivation of protein kinase B activity
A0032435biological_processnegative regulation of proteasomal ubiquitin-dependent protein catabolic process
A0032679biological_processregulation of TRAIL production
A0032757biological_processpositive regulation of interleukin-8 production
A0033138biological_processpositive regulation of peptidyl-serine phosphorylation
A0033234biological_processnegative regulation of protein sumoylation
A0033864biological_processpositive regulation of NAD(P)H oxidase activity
A0034599biological_processcellular response to oxidative stress
A0034614biological_processcellular response to reactive oxygen species
A0036470molecular_functiontyrosine 3-monooxygenase activator activity
A0036471biological_processcellular response to glyoxal
A0036478molecular_functionL-dopa decarboxylase activator activity
A0036524molecular_functionprotein deglycase activity
A0036526biological_processpeptidyl-cysteine deglycation
A0036527biological_processpeptidyl-arginine deglycation
A0036528biological_processpeptidyl-lysine deglycation
A0036529biological_processprotein deglycation, glyoxal removal
A0036530biological_processprotein deglycation, methylglyoxal removal
A0036531biological_processglutathione deglycation
A0042177biological_processnegative regulation of protein catabolic process
A0042542biological_processresponse to hydrogen peroxide
A0042593biological_processglucose homeostasis
A0042743biological_processhydrogen peroxide metabolic process
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0043005cellular_componentneuron projection
A0043523biological_processregulation of neuron apoptotic process
A0043524biological_processnegative regulation of neuron apoptotic process
A0044297cellular_componentcell body
A0044388molecular_functionsmall protein activating enzyme binding
A0044390molecular_functionubiquitin-like protein conjugating enzyme binding
A0044877molecular_functionprotein-containing complex binding
A0045121cellular_componentmembrane raft
A0045202cellular_componentsynapse
A0045296molecular_functioncadherin binding
A0045340molecular_functionmercury ion binding
A0045944biological_processpositive regulation of transcription by RNA polymerase II
A0046295biological_processglycolate biosynthetic process
A0046826biological_processnegative regulation of protein export from nucleus
A0048471cellular_componentperinuclear region of cytoplasm
A0050681molecular_functionnuclear androgen receptor binding
A0050727biological_processregulation of inflammatory response
A0050787biological_processdetoxification of mercury ion
A0050821biological_processprotein stabilization
A0051091biological_processpositive regulation of DNA-binding transcription factor activity
A0051444biological_processnegative regulation of ubiquitin-protein transferase activity
A0051583biological_processdopamine uptake involved in synaptic transmission
A0051881biological_processregulation of mitochondrial membrane potential
A0051897biological_processpositive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
A0051899biological_processmembrane depolarization
A0051920molecular_functionperoxiredoxin activity
A0060081biological_processmembrane hyperpolarization
A0060765biological_processregulation of androgen receptor signaling pathway
A0061691biological_processdetoxification of hydrogen peroxide
A0061727biological_processmethylglyoxal catabolic process to lactate
A0070062cellular_componentextracellular exosome
A0070301biological_processcellular response to hydrogen peroxide
A0070994biological_processdetection of oxidative stress
A0097110molecular_functionscaffold protein binding
A0098793cellular_componentpresynapse
A0098869biological_processcellular oxidant detoxification
A0106044biological_processguanine deglycation
A0106045biological_processguanine deglycation, methylglyoxal removal
A0106046biological_processguanine deglycation, glyoxal removal
A0110095biological_processcellular detoxification of aldehyde
A0140041biological_processcellular detoxification of methylglyoxal
A0140297molecular_functionDNA-binding transcription factor binding
A1900182biological_processpositive regulation of protein localization to nucleus
A1901671biological_processpositive regulation of superoxide dismutase activity
A1901984biological_processnegative regulation of protein acetylation
A1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
A1902177biological_processpositive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
A1902236biological_processnegative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
A1902903biological_processregulation of supramolecular fiber organization
A1902958biological_processpositive regulation of mitochondrial electron transport, NADH to ubiquinone
A1903073biological_processnegative regulation of death-inducing signaling complex assembly
A1903094biological_processnegative regulation of protein K48-linked deubiquitination
A1903122biological_processnegative regulation of TRAIL-activated apoptotic signaling pathway
A1903135molecular_functioncupric ion binding
A1903136molecular_functioncuprous ion binding
A1903168biological_processpositive regulation of pyrroline-5-carboxylate reductase activity
A1903178biological_processpositive regulation of tyrosine 3-monooxygenase activity
A1903181biological_processpositive regulation of dopamine biosynthetic process
A1903189biological_processglyoxal metabolic process
A1903190biological_processglyoxal catabolic process
A1903197biological_processpositive regulation of L-dopa biosynthetic process
A1903200biological_processpositive regulation of L-dopa decarboxylase activity
A1903376biological_processregulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
A1903377biological_processnegative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
A1903384biological_processnegative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway
A1903427biological_processnegative regulation of reactive oxygen species biosynthetic process
A1903428biological_processpositive regulation of reactive oxygen species biosynthetic process
A1903599biological_processpositive regulation of autophagy of mitochondrion
A1903751biological_processnegative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide
A1905259biological_processnegative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway
A1990381molecular_functionubiquitin-specific protease binding
A1990422molecular_functionglyoxalase (glycolic acid-forming) activity
A2000157biological_processnegative regulation of ubiquitin-specific protease activity
A2000379biological_processpositive regulation of reactive oxygen species metabolic process
A2000679biological_processpositive regulation of transcription regulatory region DNA binding
A2000825biological_processpositive regulation of androgen receptor activity
A2001237biological_processnegative regulation of extrinsic apoptotic signaling pathway
A2001268biological_processnegative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 201
ChainResidue
AALA29
AASP131
AASN173
AVAL177
AHOH301
AHOH352
AHOH533

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 202
ChainResidue
AHOH332
AHOH387
AHOH397
AHOH401
AALA179
ALYS182

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 203
ChainResidue
AASN76
AALA107
ALEU128
AACT205
AHOH378
AHOH496
AHOH523
AHOH575

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 204
ChainResidue
AGLU15
AARG28
AHIS126
APRO158
APRO184
AHOH496

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 205
ChainResidue
AASN76
AALA107
ALYS132
AEDO203
AHOH368
AHOH528

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000305|PubMed:20304780, ECO:0000305|PubMed:25416785
ChainResidueDetails
ACYS106

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000305|PubMed:20304780
ChainResidueDetails
AHIS126

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by CASP6 => ECO:0000250|UniProtKB:Q99LX0
ChainResidueDetails
AASP149

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:25944712
ChainResidueDetails
AALA2

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0007744|PubMed:15592455
ChainResidueDetails
ATYR67

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Cysteine sulfinic acid (-SO2H); alternate => ECO:0000269|PubMed:12939276
ChainResidueDetails
ACYS106

site_idSWS_FT_FI7
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q99LX0
ChainResidueDetails
ALYS148

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99LX0
ChainResidueDetails
ALYS182

site_idSWS_FT_FI9
Number of Residues2
DetailsLIPID: S-palmitoyl cysteine => ECO:0000269|PubMed:23847046
ChainResidueDetails
ACYS53
ACYS46

site_idSWS_FT_FI10
Number of Residues1
DetailsLIPID: S-palmitoyl cysteine; alternate => ECO:0000269|PubMed:23847046
ChainResidueDetails
ACYS106

site_idSWS_FT_FI11
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) => ECO:0000269|PubMed:15976810
ChainResidueDetails
ALYS130

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PDB entries from 2024-04-17

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