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4RDN

Structure of YTH-YTHDF2 in complex with m6A

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
B0003723molecular_functionRNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE 6MD A 601
ChainResidue
ALYS416
ALYS490
ATRP491
AASP528
AHOH706
AHOH715
AHOH788
AHOH810
ASER417
ATYR418
AASP422
ATRP432
ACYS433
ATHR435
AASN462
ATRP486

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 602
ChainResidue
AGLU436
AHIS437

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 603
ChainResidue
ALYS416
AVAL461
AGLY463
ASER464
AGLY465
AASN507
AHOH785
AHOH803

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 6MD B 601
ChainResidue
BLYS416
BSER417
BTYR418
BASP422
BTRP432
BCYS433
BASN462
BTRP486
BTRP491
BASP528
BHOH705
BHOH707
BHOH771
BHOH796

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 602
ChainResidue
BTHR435
BGLU436
BHIS437

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 603
ChainResidue
AHOH792
BLYS416
BVAL461
BGLY463
BSER464
BGLY465
BASN507
BTHR524

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:25412658, ECO:0007744|PDB:4RDN
ChainResidueDetails
ALYS416
BASN462
BTRP486
BTRP491
AASP422
ATRP432
AASN462
ATRP486
ATRP491
BLYS416
BASP422
BTRP432

221716

PDB entries from 2024-06-26

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