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4QTT

Structure of S. cerevisiae Bud23-Trm112 complex involved in formation of m7G1575 on 18S rRNA (apo-form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000470biological_processmaturation of LSU-rRNA
A0002098biological_processtRNA wobble uridine modification
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005730cellular_componentnucleolus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005840cellular_componentribosome
A0008270molecular_functionzinc ion binding
A0008276molecular_functionprotein methyltransferase activity
A0016435molecular_functionrRNA (guanine) methyltransferase activity
A0030488biological_processtRNA methylation
A0030490biological_processmaturation of SSU-rRNA
A0035657cellular_componenteRF1 methyltransferase complex
A0042273biological_processribosomal large subunit biogenesis
A0042274biological_processribosomal small subunit biogenesis
A0043527cellular_componenttRNA methyltransferase complex
A0043528cellular_componenttRNA (m2G10) methyltransferase complex
A0046982molecular_functionprotein heterodimerization activity
A0060566biological_processpositive regulation of termination of DNA-templated transcription
A0070476biological_processrRNA (guanine-N7)-methylation
A0160102molecular_functiontRNA (guanine(10)-N2)-methyltransferase activity
B0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
B0016435molecular_functionrRNA (guanine) methyltransferase activity
B0070476biological_processrRNA (guanine-N7)-methylation
C0000470biological_processmaturation of LSU-rRNA
C0002098biological_processtRNA wobble uridine modification
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005730cellular_componentnucleolus
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005840cellular_componentribosome
C0008270molecular_functionzinc ion binding
C0008276molecular_functionprotein methyltransferase activity
C0016435molecular_functionrRNA (guanine) methyltransferase activity
C0030488biological_processtRNA methylation
C0030490biological_processmaturation of SSU-rRNA
C0035657cellular_componenteRF1 methyltransferase complex
C0042273biological_processribosomal large subunit biogenesis
C0042274biological_processribosomal small subunit biogenesis
C0043527cellular_componenttRNA methyltransferase complex
C0043528cellular_componenttRNA (m2G10) methyltransferase complex
C0046982molecular_functionprotein heterodimerization activity
C0060566biological_processpositive regulation of termination of DNA-templated transcription
C0070476biological_processrRNA (guanine-N7)-methylation
C0160102molecular_functiontRNA (guanine(10)-N2)-methyltransferase activity
D0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
D0016435molecular_functionrRNA (guanine) methyltransferase activity
D0070476biological_processrRNA (guanine-N7)-methylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 201
ChainResidue
ACYS11
ACYS16
ACYS112
ACYS115

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 301
ChainResidue
BGLY93
BLEU95
BHOH488

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 302
ChainResidue
BGLY59
BLEU60
BSER61
BILE117
BHOH402
BGLN32
BCYS56

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 303
ChainResidue
BGLU188
DLEU170
DPHE178
DGLY180

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 304
ChainResidue
ALYS14
BARG139
BASN142
BHOH438
BHOH477

site_idAC6
Number of Residues16
DetailsBINDING SITE FOR RESIDUE 12P B 305
ChainResidue
BARG38
BLEU42
BGLY181
BLEU182
BVAL183
BVAL184
BASP185
BHOH473
DARG38
DGLY180
DGLY181
DLEU182
DVAL183
DVAL184
DASP185
DVAL198

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN C 201
ChainResidue
CCYS11
CVAL13
CCYS16
CCYS112
CCYS115

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PDB entries from 2024-07-17

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