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4QAF

Crystal structure of an engineered lipocalin (Anticalin) in complex with VEGF(8-109)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004869molecular_functioncysteine-type endopeptidase inhibitor activity
A0005102molecular_functionsignaling receptor binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0006508biological_processproteolysis
A0008270molecular_functionzinc ion binding
A0031404molecular_functionchloride ion binding
A0036094molecular_functionsmall molecule binding
A0050909biological_processsensory perception of taste
B0004869molecular_functioncysteine-type endopeptidase inhibitor activity
B0005102molecular_functionsignaling receptor binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0006508biological_processproteolysis
B0008270molecular_functionzinc ion binding
B0031404molecular_functionchloride ion binding
B0036094molecular_functionsmall molecule binding
B0050909biological_processsensory perception of taste
C0008083molecular_functiongrowth factor activity
C0016020cellular_componentmembrane
D0008083molecular_functiongrowth factor activity
D0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE OMA A 201
ChainResidue
AMET22
ALEU29
ALEU32
AMET55
AILE57
AALA66

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 C 201
ChainResidue
CASN75
CARG82
CLYS84
CHIS90
CHOH330
BPRO109
CTYR45
CSER74

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 C 202
ChainResidue
ASER91
AHIS92
CTYR25
CGLU103
CCYS104
CHOH305
CHOH320
CHOH366

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 D 201
ChainResidue
APRO109
CGLU103
CARG105
DTYR45
DARG82
DHIS90
DHOH303
DHOH309

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE ACT D 202
ChainResidue
AGLY112
AHOH327
DILE83
DPRO85
DHIS86
DGLY88
DGLN89
DHOH306
DHOH365

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OMA B 201
ChainResidue
BVAL13
BMET22
BVAL24
BVAL113
BLEU115

Functional Information from PROSITE/UniProt
site_idPS00249
Number of Residues13
DetailsPDGF_1 Platelet-derived growth factor (PDGF) family signature. PSCVplmRCGGCC
ChainResidueDetails
CPRO49-CYS61

222415

PDB entries from 2024-07-10

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