Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4OAK

Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Alanine-D-Alanine and copper (II)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004180molecular_functioncarboxypeptidase activity
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0046872molecular_functionmetal ion binding
B0004180molecular_functioncarboxypeptidase activity
B0006508biological_processproteolysis
B0008233molecular_functionpeptidase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU A 201
ChainResidue
AHIS95
AASP102
AHIS156
ADAL202

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 204
ChainResidue
ATYR152
AHOH431
AGLU142
AASP143
ALYS144
AGLN145
ASER151

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 205
ChainResidue
AGLU66
AHOH326
AHOH352
AHOH415
BGLU66
BHOH420

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 206
ChainResidue
BASP112

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 207
ChainResidue
AARG69
BHOH393

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 208
ChainResidue
ATHR63

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 209
ChainResidue
AHIS11
AHOH349

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE3 A 210
ChainResidue
APHE189
AHOH465
BHIS179
BALA183

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE3 A 211
ChainResidue
AHIS179
AALA183
AHOH456
BPHE189

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU B 201
ChainResidue
BHIS95
BASP102
BHIS156
BDAL202

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DAL B 202
ChainResidue
BPHE86
BHIS95
BASP102
BILE114
BTRP155
BHIS156
BCU201
BDAL203

site_idBC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE DAL B 203
ChainResidue
BARG62
BGLN67
BPHE86
BALA88
BSER93
BHIS95
BTYR140
BGLU153
BDAL202
BHOH301

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 204
ChainResidue
AHIS21
ALEU22
BARG68
BARG69
BHOH328

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 205
ChainResidue
ATHR63
AHOH352
BTHR63
BLYS65
BARG69
BHOH326

site_idBC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 206
ChainResidue
BHIS11

site_idBC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 207
ChainResidue
BASP143

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE3 B 208
ChainResidue
BMET1
BPRO20
BHIS21
BGLN35

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PE3 B 209
ChainResidue
BTRP173
BGLU177
BASP180

site_idCC1
Number of Residues11
DetailsBINDING SITE FOR LINKED RESIDUES A 202 to 203
ChainResidue
AGLN67
APHE86
AALA88
ASER93
AHIS95
AASP102
AGLU153
ATRP155
AHIS156
ACU201
AHOH301

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon