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4MVJ

2.85 Angstrom Resolution Crystal Structure of Glyceraldehyde 3-phosphate Dehydrogenase A (gapA) from Escherichia coli Modified by Acetyl Phosphate.

Functional Information from GO Data
ChainGOidnamespacecontents
A0006006biological_processglucose metabolic process
A0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
A0050661molecular_functionNADP binding
A0051287molecular_functionNAD binding
B0006006biological_processglucose metabolic process
B0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
B0050661molecular_functionNADP binding
B0051287molecular_functionNAD binding
C0006006biological_processglucose metabolic process
C0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
C0050661molecular_functionNADP binding
C0051287molecular_functionNAD binding
D0006006biological_processglucose metabolic process
D0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
D0050661molecular_functionNADP binding
D0051287molecular_functionNAD binding
E0006006biological_processglucose metabolic process
E0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
E0050661molecular_functionNADP binding
E0051287molecular_functionNAD binding
F0006006biological_processglucose metabolic process
F0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
F0050661molecular_functionNADP binding
F0051287molecular_functionNAD binding
G0006006biological_processglucose metabolic process
G0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
G0050661molecular_functionNADP binding
G0051287molecular_functionNAD binding
H0006006biological_processglucose metabolic process
H0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
H0050661molecular_functionNADP binding
H0051287molecular_functionNAD binding
I0006006biological_processglucose metabolic process
I0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
I0050661molecular_functionNADP binding
I0051287molecular_functionNAD binding
J0006006biological_processglucose metabolic process
J0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
J0050661molecular_functionNADP binding
J0051287molecular_functionNAD binding
K0006006biological_processglucose metabolic process
K0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
K0050661molecular_functionNADP binding
K0051287molecular_functionNAD binding
L0006006biological_processglucose metabolic process
L0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
L0050661molecular_functionNADP binding
L0051287molecular_functionNAD binding
M0006006biological_processglucose metabolic process
M0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
M0050661molecular_functionNADP binding
M0051287molecular_functionNAD binding
N0006006biological_processglucose metabolic process
N0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
N0050661molecular_functionNADP binding
N0051287molecular_functionNAD binding
O0006006biological_processglucose metabolic process
O0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
O0050661molecular_functionNADP binding
O0051287molecular_functionNAD binding
P0006006biological_processglucose metabolic process
P0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
P0050661molecular_functionNADP binding
P0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 401
ChainResidue
AALA21
AARG24
AILE27
AHOH508
AHOH524

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 402
ChainResidue
AMET129

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 403
ChainResidue
AGLY133
AALA134

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 404
ChainResidue
AASP137

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 405
ChainResidue
AARG19
AASP55

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 406
ChainResidue
ATRP194
CASP278
CLYS296

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 407
ChainResidue
ALYS257
AALA295
ALYS296

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 A 408
ChainResidue
AASP278
CTRP194

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE POP A 409
ChainResidue
AGLY11
AARG12
AILE13
AALA181

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 401
ChainResidue
BALA21
BARG24
BILE27
BHOH534

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 402
ChainResidue
BALA251
BASN302
BASP303
BVAL306

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 403
ChainResidue
BASP55

site_idBC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 404
ChainResidue
BARG53

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 405
ChainResidue
BVAL58

site_idBC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 406
ChainResidue
BGLY133
BPHE136

site_idBC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 407
ChainResidue
BASP37

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 408
ChainResidue
BPRO128
BMET129

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 B 409
ChainResidue
BTYR253
BLYS257
BALA295
BLYS296

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE POP B 410
ChainResidue
BGLY11
BARG12
BILE13
BHOH502
BHOH530
BHOH531

site_idCC2
Number of Residues19
DetailsBINDING SITE FOR RESIDUE NAD C 401
ChainResidue
CASN8
CPHE10
CGLY11
CARG12
CILE13
CASP34
CARG78
CALA96
CTHR97
CGLY98
CLEU99
CTHR120
CCYS150
CTHR180
CALA181
CASN314
CHOH534
CHOH543
CHOH549

site_idCC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA C 402
ChainResidue
CALA21
CARG24
CILE27
CHOH517
CHOH518

site_idCC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 403
ChainResidue
CARG19
CASP55
CHOH553

site_idCC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL C 404
ChainResidue
CPRO128
CMET129

site_idCC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL C 405
ChainResidue
CGLY133
CPHE136

site_idCC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL C 406
ChainResidue
CLYS257

site_idCC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL C 407
ChainResidue
CALA250

site_idCC9
Number of Residues12
DetailsBINDING SITE FOR RESIDUE NAD D 401
ChainResidue
DGLY11
DARG12
DILE13
DASP34
DALA96
DGLY98
DLEU99
DTHR120
DCYS150
DALA181
DASN314
DHOH529

site_idDC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA D 402
ChainResidue
DALA21
DARG24
DILE27
DHOH523

site_idDC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL D 403
ChainResidue
DASP39

site_idDC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL D 404
ChainResidue
DVAL58

site_idDC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 405
ChainResidue
DARG19
DPHE54
DASP55

site_idDC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL D 406
ChainResidue
DGLY133
DPHE136

site_idDC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL D 407
ChainResidue
DMET129

site_idDC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 D 408
ChainResidue
BASP278
DTRP194
DHOH537

site_idDC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 D 409
ChainResidue
AASP277
CTRP194
DASP39
DTYR43
DLYS46
DTYR47
DHOH522

site_idDC9
Number of Residues16
DetailsBINDING SITE FOR RESIDUE NAD E 401
ChainResidue
EASN8
EGLY9
EGLY11
EARG12
EILE13
EASP34
EARG78
EALA96
ETHR97
EGLY98
ELEU99
ETHR120
ECYS150
EALA181
EASN314
EHOH510

site_idEC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA E 402
ChainResidue
EALA21
EILE27
EGLU28

site_idEC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL E 403
ChainResidue
EMET129
ELYS217

site_idEC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL E 404
ChainResidue
EGLY133
EALA134
EPHE136

site_idEC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL E 406
ChainResidue
ELYS257
EHOH518

site_idEC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL E 407
ChainResidue
EARG19
EASP55

site_idEC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 E 408
ChainResidue
EASP278
ELYS296
GTRP194

site_idEC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL F 401
ChainResidue
FGLY133
FPHE136

site_idEC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 F 402
ChainResidue
FTRP194
HASP278

site_idEC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE POP F 403
ChainResidue
FGLY11
FARG12
FILE13
FALA181
FHOH507

site_idFC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA G 401
ChainResidue
GALA21
GARG24
GILE27

site_idFC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL G 402
ChainResidue
GASP39
GVAL60

site_idFC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL G 403
ChainResidue
GGLY133
GPHE136

site_idFC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL G 404
ChainResidue
GASP55

site_idFC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL G 405
ChainResidue
GLYS257

site_idFC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE POP G 406
ChainResidue
GGLY11
GARG12
GILE13
GALA181

site_idFC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA H 401
ChainResidue
HALA21
HARG24
HILE27

site_idFC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL H 402
ChainResidue
HLEU36
HASP37

site_idFC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 H 403
ChainResidue
FASP278
HTRP194

site_idGC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ACT H 404
ChainResidue
EASP277

site_idGC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PGE H 405
ChainResidue
HLYS124
HASP125
HASN126

site_idGC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PEG H 406
ChainResidue
HASP164
HASN165
HGLU248

site_idGC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE NAD I 401
ChainResidue
IASN8
IPHE10
IGLY11
IARG12
IILE13
IASP34
IARG78
ITHR97
IGLY98
ILEU99
ITHR120
ICYS150
IALA181
IASN314
IHOH521

site_idGC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA I 402
ChainResidue
IALA21
IARG24
IILE27

site_idGC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL I 404
ChainResidue
IASP39

site_idGC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 I 405
ChainResidue
ITRP194
KASP278

site_idGC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL J 401
ChainResidue
JASP55

site_idGC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL J 402
ChainResidue
JARG53

site_idHC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 J 403
ChainResidue
JTRP194
LASP278

site_idHC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 J 404
ChainResidue
JASP278
JLYS296
JHOH525
LTRP194

site_idHC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PG4 J 405
ChainResidue
JLYS124
JASP125
JASN126

site_idHC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE POP J 406
ChainResidue
JGLY11
JARG12
JILE13
JALA181
JHOH509

site_idHC5
Number of Residues15
DetailsBINDING SITE FOR RESIDUE NAD K 401
ChainResidue
KASN8
KGLY9
KGLY11
KARG12
KILE13
KASP34
KALA96
KTHR97
KGLY98
KLEU99
KTHR120
KCYS150
KALA181
KASN314
KHOH519

site_idHC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA K 402
ChainResidue
KALA21
KARG24
KILE27

site_idHC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL K 403
ChainResidue
KMET129

site_idHC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL K 404
ChainResidue
KLYS257

site_idHC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL K 405
ChainResidue
KGLY133
KPHE136

site_idIC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL K 406
ChainResidue
KARG19
KASP55

site_idIC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL K 407
ChainResidue
KVAL58

site_idIC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL K 408
ChainResidue
KASN126

site_idIC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL L 401
ChainResidue
LLYS257

site_idIC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 L 402
ChainResidue
LPHE166
LGLY167
LGLU248
LLYS249

site_idIC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA M 401
ChainResidue
MALA21
MARG24
MILE27
MHOH506
MHOH507

site_idIC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL M 402
ChainResidue
MLYS46

site_idIC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL M 403
ChainResidue
MGLY133
MPHE136

site_idIC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UVW M 404
ChainResidue
MTRP194
OASP278
OLYS296

site_idJC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE POP M 405
ChainResidue
MGLY11
MARG12
MILE13
MALA96
MALA181
MHOH515

site_idJC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA N 401
ChainResidue
NALA21
NARG24
NILE27

site_idJC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL N 402
ChainResidue
NLYS257

site_idJC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE NAD O 401
ChainResidue
OASN8
OPHE10
OGLY11
OARG12
OILE13
OASP34
OARG78
OALA96
OTHR97
OLEU99
OTHR120
OCYS150
OALA181
OASN314
OHOH514

site_idJC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL O 402
ChainResidue
MASP278

site_idJC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL O 403
ChainResidue
OGLY133
OPHE136

site_idJC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE NAD P 401
ChainResidue
PGLY9
PGLY11
PARG12
PILE13
PASP34
PALA96
PTHR97
PGLY98
PLEU99
PTHR120
PSCY150
PALA181
PASN314
PGLU315
PTYR318

site_idJC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL P 402
ChainResidue
PARG19
PASP55

site_idJC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL P 403
ChainResidue
PLYS257

site_idKC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 P 404
ChainResidue
NTRP194
PASP278
PLYS296

site_idKC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 P 405
ChainResidue
NASP278
PTRP194

Functional Information from PROSITE/UniProt
site_idPS00071
Number of Residues8
DetailsGAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL
ChainResidueDetails
HALA148-LEU155
AALA148-LEU155
DALA148-LEU155
EALA148-LEU155
FALA148-LEU155
GALA148-LEU155
IALA148-LEU155
MALA148-LEU155
PALA148-LEU155

218853

PDB entries from 2024-04-24

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