4MMS
Crystal Structure of Prefusion-stabilized RSV F Variant Cav1 at pH 5.5
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
| B | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
| C | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
| D | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
| E | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
| F | 0019064 | biological_process | fusion of virus membrane with host plasma membrane |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 B 601 |
| Chain | Residue |
| B | PHE137 |
| B | ARG339 |
| B | GLN354 |
| B | HOH777 |
| B | HOH815 |
| E | ARG106 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 602 |
| Chain | Residue |
| B | SER466 |
| B | HOH798 |
| B | SER443 |
| B | LYS445 |
| B | LYS465 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 603 |
| Chain | Residue |
| B | LEU273 |
| B | ASN277 |
| B | ARG364 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 604 |
| Chain | Residue |
| B | ASN426 |
| B | ARG429 |
| B | HOH840 |
| F | SER186 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 605 |
| Chain | Residue |
| B | ASN325 |
| B | THR326 |
| B | LYS327 |
| B | HOH849 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 D 601 |
| Chain | Residue |
| A | ARG106 |
| D | PHE137 |
| D | ARG339 |
| D | GLN354 |
| D | HOH802 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 D 602 |
| Chain | Residue |
| D | SER443 |
| D | LYS445 |
| D | GLY464 |
| D | LYS465 |
| D | SER466 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 D 603 |
| Chain | Residue |
| D | LEU273 |
| D | ASN277 |
| D | ARG364 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 D 604 |
| Chain | Residue |
| D | ASN444 |
| D | LYS445 |
| D | GLY446 |
| D | LYS461 |
| D | SO4605 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 D 605 |
| Chain | Residue |
| D | PRO265 |
| D | ASN426 |
| D | LYS427 |
| D | ASN428 |
| D | ARG429 |
| D | SO4604 |
| site_id | BC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 F 601 |
| Chain | Residue |
| F | SER443 |
| F | LYS445 |
| F | LYS465 |
| F | SER466 |
| F | HOH775 |
| F | HOH830 |
| site_id | BC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 F 602 |
| Chain | Residue |
| F | PHE137 |
| F | ARG339 |
| site_id | BC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 F 603 |
| Chain | Residue |
| F | LEU273 |
| F | ARG364 |
| F | HOH801 |
| F | HOH813 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 F 604 |
| Chain | Residue |
| F | ASN444 |
| F | LYS445 |
| F | GLY446 |
| F | LYS461 |
| F | HOH849 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 60 |
| Details | Coiled coil: {"evidences":[{"source":"PubMed","id":"10846072","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29212939","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"PubMed","id":"21586636","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"PubMed","id":"21586636","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28469033","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 60 |
| Details | Region: {"description":"Fusion peptide","evidences":[{"source":"UniProtKB","id":"P11209","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 153 |
| Details | Coiled coil: {"evidences":[{"source":"PubMed","id":"19966279","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31268705","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"10846072","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 3 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"PubMed","id":"21586636","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24179220","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
