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4LMD

Crystal structure of the JCV large t-antigen origin binding domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0003688molecular_functionDNA replication origin binding
A0006260biological_processDNA replication
B0003688molecular_functionDNA replication origin binding
B0006260biological_processDNA replication
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
AILE249
AASP257
AHOH440
AHOH499
AHOH573

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE FLC B 301
ChainResidue
BHOH417
BHOH441
BHOH447
BHOH452
BHOH475
BHOH476
BHOH567
BHOH574
AHIS204
AALA208
BHIS202
BARG203

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE FLC B 302
ChainResidue
AASN228
ALYS229
AGLU230
AASN259
AGLU261
BSER153
BASN154
BHOH478
BHOH489
BHOH542
BHOH576

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 303
ChainResidue
AASN259
BSER148
BALA150
BSER153
BARG155
BVAL206
BGLY226
BHOH428
BHOH486

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues230
DetailsDNA_BIND: T-ag OBD => ECO:0000255|PROSITE-ProRule:PRU00620
ChainResidueDetails
APRO140-GLU255
BPRO140-GLU255

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PDB entries from 2024-07-31

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