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4H3Z

Crystal structure of a symmetric dimer of a tRNA (guanine-(N(1)-)-methyltransferase from Burkholderia phymatum bound to S-adenosyl homocystein in both half-sites

Functional Information from GO Data
ChainGOidnamespacecontents
A0002939biological_processtRNA N1-guanine methylation
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
A0052906molecular_functiontRNA (guanine(37)-N1)-methyltransferase activity
B0002939biological_processtRNA N1-guanine methylation
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006400biological_processtRNA modification
B0008033biological_processtRNA processing
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
B0052906molecular_functiontRNA (guanine(37)-N1)-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues22
DetailsBINDING SITE FOR RESIDUE SAH A 301
ChainResidue
AMET91
AGLY138
APHE140
ALEU142
AGLY144
AGLY145
APRO148
AHOH414
AHOH445
AHOH467
BASP173
ASER92
BSER174
BASP181
BHOH468
APRO93
AGLY117
ATYR119
AGLU120
AVAL135
ASER136
ALEU137

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 302
ChainResidue
AHIS100
AHIS159
BPHE140
BVAL141

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 303
ChainResidue
APHE140
AVAL141
BHIS100
BHIS159

site_idAC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE SAH B 301
ChainResidue
AASP173
ASER174
AASP181
BMET91
BSER92
BPRO93
BGLY117
BTYR119
BGLU120
BVAL135
BSER136
BLEU137
BGLY138
BPHE140
BLEU142
BGLY144
BGLY145
BPRO148
BHOH442
BHOH444

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00605
ChainResidueDetails
AGLY117
ALEU137
BGLY117
BLEU137

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PDB entries from 2024-07-10

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