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4GA3

Crystal Structure of Human Farnesyl Diphosphate Synthase in Complex with BPH-1260

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE 4GA A 1001
ChainResidue
APHE99
AMG1002
AMG1003
AMG1004
APO41005
AHOH1101
AHOH1102
AHOH1103
AHOH1107
AHOH1111
AHOH1117
AASP103
AASP107
AARG112
AGLN171
ALYS200
AGLN240
AASP243
ALYS257

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1002
ChainResidue
AASP243
A4GA1001
AHOH1105
AHOH1106
AHOH1107

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1003
ChainResidue
AASP103
AASP107
A4GA1001
AMG1004
AHOH1103
AHOH1104

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1004
ChainResidue
AASP103
AASP107
A4GA1001
AMG1003
AHOH1101
AHOH1102

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 1005
ChainResidue
AARG60
AGLN96
APHE239
AASP243
ALYS257
AARG351
A4GA1001
APO41006
AHOH1124

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 1006
ChainResidue
AGLY56
ALYS57
AARG60
AGLN96
AARG113
APO41005
AHOH1114
AHOH1124
AHOH1160

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
AMET235-ASP247

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
ALEU100-GLY114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16684881, ECO:0007744|PDB:1ZW5
ChainResidueDetails
ALYS57
AARG60
AGLN96
AASP103
AASP107
AARG113

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
AARG112
ALYS200
ATHR201
AGLN240
ALYS257

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ALYS266

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Important for determining product chain length => ECO:0000250
ChainResidueDetails
APHE98
APHE99

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS57

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS287

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PDB entries from 2024-11-06

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