Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4F1H

Crystal structure of TDP2 from Danio rerio complexed with a single strand DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
B0003824molecular_functioncatalytic activity
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PO4 C 101
ChainResidue
CDG5

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 401
ChainResidue
AHOH763
BLEU178
AGLN299
AHIS301
ACYS302
AHIS342
AMET343
AHOH517
AHOH670
AHOH762

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AGLU161
AHOH531
AHOH678
CDT1

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 403
ChainResidue
AGLY186
ATYR187
APHE200
ALEU201
AMET213
AMET214
AHOH505
AHOH560
AHOH598
AHOH772

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 401
ChainResidue
BARG303
BARG323
BARG326
BHOH675
BHOH782

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 402
ChainResidue
BLEU138
BALA165
BTYR166

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000250|UniProtKB:O95551
ChainResidueDetails
BASP271

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q9JJX7
ChainResidueDetails
BASP131

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:23104058, ECO:0007744|PDB:4FPV
ChainResidueDetails
BGLU161

site_idSWS_FT_FI4
Number of Residues3
DetailsSITE: Interaction with 5' end of substrate DNA => ECO:0000250|UniProtKB:Q9JJX7
ChainResidueDetails
BTYR187
BTRP306
BPHE324

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Interaction with 5' end of substrate DNA => ECO:0000269|PubMed:23104058
ChainResidueDetails
BHIS360

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon