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4EM9

Human PPAR gamma in complex with nonanoic acids

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE KNA A 501
ChainResidue
ACYS285
AARG288
ASER289
AILE326
ALEU333
AMET364
AKNA503
AGOL504

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE KNA A 502
ChainResidue
ACYS285
ASER289
AHIS323
APHE363
AHIS449
ATYR473
APHE282

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE KNA A 503
ChainResidue
AARG288
ALEU340
AILE341
ASER342
AKNA501
AHOH733

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 504
ChainResidue
APHE226
ALEU228
AARG288
AGLU295
AMET329
ALEU333
AKNA501
AHOH637

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE KNA B 501
ChainResidue
BCYS285
BARG288
BSER289
BALA292
BILE326
BTYR327
BMET364
BHIS449
BGOL504

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE TCE B 502
ChainResidue
BGLU259
BPHE264
BHIS266
BCYS285
BILE341
BSER342
BHOH664

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE GOL B 503
ChainResidue
BASN312

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 504
ChainResidue
BPRO227
BLEU228
BARG288
BGLU295
BMET329
BLEU333
BKNA501
BHOH613

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsMotif: {"description":"9aaTAD","evidences":[{"source":"PubMed","id":"30468856","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9744270","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2PRG","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"36737649","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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