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4E0D

Binary complex of Bacillus DNA Polymerase I Large Fragment E658A and duplex DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006139biological_processnucleobase-containing compound metabolic process
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0008408molecular_function3'-5' exonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 901
ChainResidue
AARG702
ALYS706
AMES909
AHOH1097

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 902
ChainResidue
ASER655
AGLN656
AMES909
AHOH1097
AHOH1141

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 903
ChainResidue
ALYS298
AMET299
AALA300
AARG343
AARG677
AHOH1313
AHOH1657

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 904
ChainResidue
AHIS568
AARG779
AARG819
AHOH1480
AHOH1633

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 905
ChainResidue
AGLU324
AARG435

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MPD A 906
ChainResidue
AARG472
AGLU476
ALYS806
ADCP910
AHOH1724

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MPD A 907
ChainResidue
AGLU506
ALEU507
AGLN510
AGLU632
ALYS635

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE MPD A 908
ChainResidue
AGLU321
AVAL322
AVAL323
AGLU325
AASP425
ATYR429
AARG435
AHOH1252
AHOH1259
AHOH1406

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MES A 909
ChainResidue
AASP680
AILE681
AHIS682
ASO4901
ASO4902
AHOH1668

site_idBC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE DCP A 910
ChainResidue
AGLU469
AGLN470
AASP471
AARG472
ALEU473
ALEU767
AHIS768
AMPD906
AHOH1199
AHOH1253
AHOH1369
AHOH1488
AHOH1563
AHOH1696

Functional Information from PROSITE/UniProt
site_idPS00447
Number of Residues20
DetailsDNA_POLYMERASE_A DNA polymerase family A signature. RrqAKavnFGivYgiSdygL
ChainResidueDetails
AARG702-LEU721

224572

PDB entries from 2024-09-04

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