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4DEM

Crystal structure of human FPPS in complex with YS_04_70

Functional Information from GO Data
ChainGOidnamespacecontents
F0004659molecular_functionprenyltransferase activity
F0008299biological_processisoprenoid biosynthetic process
F0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE YS4 F 401
ChainResidue
FPHE113
FLYS214
FTHR215
FASP257
FLYS271
FMG402
FMG403
FMG404
FHOH502
FHOH505
FHOH506
FASP117
FHOH509
FHOH514
FHOH526
FHOH527
FHOH533
FHOH546
FHOH646
FMET120
FASP121
FARG126
FASN144
FASN147
FTHR181
FGLN185

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG F 402
ChainResidue
FASP117
FASP121
FYS4401
FMG403
FHOH505
FHOH520
FHOH546

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 403
ChainResidue
FASP117
FASP121
FYS4401
FMG402
FHOH502
FHOH511

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG F 404
ChainResidue
FASP257
FYS4401
FHOH506
FHOH509
FHOH526

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
FMET249-ASP261

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
FLEU114-GLY128

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"16684881","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1ZW5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsSite: {"description":"Important for determining product chain length","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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