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4D9Q

Inhibiting Alternative Pathway Complement Activation by Targeting the Exosite on Factor D

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0005615cellular_componentextracellular space
A0006508biological_processproteolysis
A0006957biological_processcomplement activation, alternative pathway
A0008236molecular_functionserine-type peptidase activity
A0009617biological_processresponse to bacterium
A0046872molecular_functionmetal ion binding
B0004252molecular_functionserine-type endopeptidase activity
B0005615cellular_componentextracellular space
B0006508biological_processproteolysis
B0006957biological_processcomplement activation, alternative pathway
B0008236molecular_functionserine-type peptidase activity
B0009617biological_processresponse to bacterium
B0046872molecular_functionmetal ion binding
D0005576cellular_componentextracellular region
D0005615cellular_componentextracellular space
D0006955biological_processimmune response
D0046872molecular_functionmetal ion binding
L0005576cellular_componentextracellular region
L0005615cellular_componentextracellular space
L0006955biological_processimmune response
L0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
AASP129
HTYR54
AVAL130
AVAL162
ALEU163
AASP164
AARG165
AMET181
ACYS182
AHOH492

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 302
ChainResidue
AASN222
ALYS223
ALYS224
LASP30
LASP31
LASP32
LZN302

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 303
ChainResidue
AHIS57
AASP61

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
AARG150
APRO152
AASP153
AARG154
AHOH500

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 305
ChainResidue
ASER190
ASER195
ATHR214
AARG218
AHOH515

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL B 301
ChainResidue
BASP129
BVAL130
BVAL162
BLEU163
BASP164
BARG165
BMET181
BCYS182
BHOH445
ETYR54

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 302
ChainResidue
BLEU135
BLEU159
BVAL200
BCYS201
BGLY202
BGLY207

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 303
ChainResidue
BGLN125
BARG129
BASP129
BGLU210
BHOH412
BHOH436
BHOH437
BHOH439

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 304
ChainResidue
AHIS25
AGLU77
BGLU131

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 305
ChainResidue
BARG150
BPRO152
BASP153
BARG154

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL D 301
ChainResidue
BARG170
BTHR170
BLYS224
DASP31
DASP32

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL D 302
ChainResidue
DLEU54
DARG55
DGLY57
DVAL58

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN D 303
ChainResidue
AHIS146
AHOH407
DASP1

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN D 304
ChainResidue
DASN138
EHIS172

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL E 301
ChainResidue
AGLY202
AHOH440
ELYS19
ESER71
ELEU72
EHOH450

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL E 302
ChainResidue
EARG38
EGLU46
EASP63
EARG67
EPHE68
EHOH485

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL H 301
ChainResidue
HGLN113
HGLY114
HTHR115
HLEU116
HPRO157
HHOH433

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN H 302
ChainResidue
HHIS172
LASN138

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN L 301
ChainResidue
DHOH505
LASP28

site_idCC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN L 302
ChainResidue
AGOL302
LASP31
LASP32

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LSAAHC
ChainResidueDetails
ALEU53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DSckGDSGGPLV
ChainResidueDetails
AASP189-VAL200

site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
ETYR202-HIS208
DTYR192-HIS198

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PDB entries from 2024-07-24

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