4CYG
The structure of vanin-1: defining the link between metabolic disease, oxidative stress and inflammation
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0002526 | biological_process | acute inflammatory response |
A | 0002544 | biological_process | chronic inflammatory response |
A | 0005576 | cellular_component | extracellular region |
A | 0005886 | cellular_component | plasma membrane |
A | 0006954 | biological_process | inflammatory response |
A | 0006979 | biological_process | response to oxidative stress |
A | 0015938 | biological_process | coenzyme A catabolic process |
A | 0015939 | biological_process | pantothenate metabolic process |
A | 0016020 | cellular_component | membrane |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016811 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
A | 0017159 | molecular_function | pantetheine hydrolase activity |
A | 0033089 | biological_process | positive regulation of T cell differentiation in thymus |
A | 0035577 | cellular_component | azurophil granule membrane |
A | 0045087 | biological_process | innate immune response |
A | 0098552 | cellular_component | side of membrane |
A | 0098609 | biological_process | cell-cell adhesion |
A | 1902177 | biological_process | positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway |
B | 0002526 | biological_process | acute inflammatory response |
B | 0002544 | biological_process | chronic inflammatory response |
B | 0005576 | cellular_component | extracellular region |
B | 0005886 | cellular_component | plasma membrane |
B | 0006954 | biological_process | inflammatory response |
B | 0006979 | biological_process | response to oxidative stress |
B | 0015938 | biological_process | coenzyme A catabolic process |
B | 0015939 | biological_process | pantothenate metabolic process |
B | 0016020 | cellular_component | membrane |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016811 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
B | 0017159 | molecular_function | pantetheine hydrolase activity |
B | 0033089 | biological_process | positive regulation of T cell differentiation in thymus |
B | 0035577 | cellular_component | azurophil granule membrane |
B | 0045087 | biological_process | innate immune response |
B | 0098552 | cellular_component | side of membrane |
B | 0098609 | biological_process | cell-cell adhesion |
B | 1902177 | biological_process | positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00054, ECO:0000305|PubMed:25478849 |
Chain | Residue | Details |
A | GLU79 | |
B | GLU79 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor => ECO:0000255|PROSITE-ProRule:PRU00054, ECO:0000305|PubMed:25478849 |
Chain | Residue | Details |
A | LYS178 | |
B | LYS178 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | ACT_SITE: Nucleophile => ECO:0000255|PROSITE-ProRule:PRU00054, ECO:0000269|PubMed:25478849 |
Chain | Residue | Details |
A | CYS211 | |
B | CYS211 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | LIPID: GPI-anchor amidated glycine => ECO:0000255 |
Chain | Residue | Details |
A | GLY491 | |
B | GLY491 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:15084671, ECO:0007744|PDB:4CYF, ECO:0007744|PDB:4CYG, ECO:0007744|PDB:4CYY |
Chain | Residue | Details |
A | ASN38 | |
B | ASN38 |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0007744|PDB:4CYF, ECO:0007744|PDB:4CYG, ECO:0007744|PDB:4CYY |
Chain | Residue | Details |
A | ASN130 | |
A | ASN315 | |
B | ASN130 | |
B | ASN315 |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255, ECO:0007744|PDB:4CYY |
Chain | Residue | Details |
A | ASN200 | |
B | ASN200 |
site_id | SWS_FT_FI8 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952 |
Chain | Residue | Details |
A | ASN283 | |
B | ASN283 |
site_id | SWS_FT_FI9 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:15084671, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218, ECO:0007744|PDB:4CYF, ECO:0007744|PDB:4CYG, ECO:0007744|PDB:4CYY |
Chain | Residue | Details |
A | ASN353 | |
B | ASN353 |