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4BXF

60S ribosomal protein L27A histidine hydroxylase (MINA53 Y209C) in complex with MN(II), 2-oxoglutarate (2OG) and 60S ribosomal protein L27A (RPL27A G37C) peptide fragment

Functional Information from GO Data
ChainGOidnamespacecontents
A0003714molecular_functiontranscription corepressor activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005667cellular_componenttranscription regulator complex
A0005730cellular_componentnucleolus
A0005829cellular_componentcytosol
A0006338biological_processchromatin remodeling
A0016491molecular_functionoxidoreductase activity
A0032452molecular_functionhistone demethylase activity
A0032453molecular_functionhistone H3K4 demethylase activity
A0036139molecular_functionpeptidyl-histidine dioxygenase activity
A0042254biological_processribosome biogenesis
A0042802molecular_functionidentical protein binding
A0045892biological_processnegative regulation of DNA-templated transcription
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
A0051864molecular_functionhistone H3K36 demethylase activity
B0003714molecular_functiontranscription corepressor activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005667cellular_componenttranscription regulator complex
B0005730cellular_componentnucleolus
B0005829cellular_componentcytosol
B0006338biological_processchromatin remodeling
B0016491molecular_functionoxidoreductase activity
B0032452molecular_functionhistone demethylase activity
B0032453molecular_functionhistone H3K4 demethylase activity
B0036139molecular_functionpeptidyl-histidine dioxygenase activity
B0042254biological_processribosome biogenesis
B0042802molecular_functionidentical protein binding
B0045892biological_processnegative regulation of DNA-templated transcription
B0046872molecular_functionmetal ion binding
B0051213molecular_functiondioxygenase activity
B0051864molecular_functionhistone H3K36 demethylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 601
ChainResidue
AHIS179
AASP181
AHIS240
AAKG901
AHOH2098

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE AKG A 901
ChainResidue
AHIS240
AHIS253
ATHR255
AMN601
AHOH2098
AHOH2099
AHOH2106
AHOH2110
ATYR167
AHIS179
AASP181
ALYS194

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN B 601
ChainResidue
BHIS179
BASP181
BHIS240
BAKG901
BHOH2037

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE AKG B 901
ChainResidue
BHIS179
BASP181
BLYS194
BHIS240
BHIS253
BTHR255
BMN601
BHOH2037
BHOH2038

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: (3S)-3-hydroxyhistidine => ECO:0000269|PubMed:23103944
ChainResidueDetails
CHIS39
DHIS39

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
CLYS47
DLYS47
BASP181
BHIS240

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:20068231
ChainResidueDetails
ASER309
BSER309

218196

PDB entries from 2024-04-10

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