4BOF
Crystal structure of arginine deiminase from group A streptococcus
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0006525 | biological_process | arginine metabolic process |
A | 0006527 | biological_process | arginine catabolic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016990 | molecular_function | arginine deiminase activity |
A | 0019546 | biological_process | arginine deiminase pathway |
A | 0019547 | biological_process | arginine catabolic process to ornithine |
B | 0005737 | cellular_component | cytoplasm |
B | 0006525 | biological_process | arginine metabolic process |
B | 0006527 | biological_process | arginine catabolic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016990 | molecular_function | arginine deiminase activity |
B | 0019546 | biological_process | arginine deiminase pathway |
B | 0019547 | biological_process | arginine catabolic process to ornithine |
C | 0005737 | cellular_component | cytoplasm |
C | 0006525 | biological_process | arginine metabolic process |
C | 0006527 | biological_process | arginine catabolic process |
C | 0016787 | molecular_function | hydrolase activity |
C | 0016990 | molecular_function | arginine deiminase activity |
C | 0019546 | biological_process | arginine deiminase pathway |
C | 0019547 | biological_process | arginine catabolic process to ornithine |
D | 0005737 | cellular_component | cytoplasm |
D | 0006525 | biological_process | arginine metabolic process |
D | 0006527 | biological_process | arginine catabolic process |
D | 0016787 | molecular_function | hydrolase activity |
D | 0016990 | molecular_function | arginine deiminase activity |
D | 0019546 | biological_process | arginine deiminase pathway |
D | 0019547 | biological_process | arginine catabolic process to ornithine |
E | 0005737 | cellular_component | cytoplasm |
E | 0006525 | biological_process | arginine metabolic process |
E | 0006527 | biological_process | arginine catabolic process |
E | 0016787 | molecular_function | hydrolase activity |
E | 0016990 | molecular_function | arginine deiminase activity |
E | 0019546 | biological_process | arginine deiminase pathway |
E | 0019547 | biological_process | arginine catabolic process to ornithine |
F | 0005737 | cellular_component | cytoplasm |
F | 0006525 | biological_process | arginine metabolic process |
F | 0006527 | biological_process | arginine catabolic process |
F | 0016787 | molecular_function | hydrolase activity |
F | 0016990 | molecular_function | arginine deiminase activity |
F | 0019546 | biological_process | arginine deiminase pathway |
F | 0019547 | biological_process | arginine catabolic process to ornithine |
G | 0005737 | cellular_component | cytoplasm |
G | 0006525 | biological_process | arginine metabolic process |
G | 0006527 | biological_process | arginine catabolic process |
G | 0016787 | molecular_function | hydrolase activity |
G | 0016990 | molecular_function | arginine deiminase activity |
G | 0019546 | biological_process | arginine deiminase pathway |
G | 0019547 | biological_process | arginine catabolic process to ornithine |
H | 0005737 | cellular_component | cytoplasm |
H | 0006525 | biological_process | arginine metabolic process |
H | 0006527 | biological_process | arginine catabolic process |
H | 0016787 | molecular_function | hydrolase activity |
H | 0016990 | molecular_function | arginine deiminase activity |
H | 0019546 | biological_process | arginine deiminase pathway |
H | 0019547 | biological_process | arginine catabolic process to ornithine |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 420 |
Chain | Residue |
A | TYR367 |
A | ASN368 |
A | ARG369 |
A | ILE387 |
A | HIS388 |
A | GLY389 |
A | SER390 |
H | PHE46 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 421 |
Chain | Residue |
A | ARG101 |
A | GLY142 |
A | THR144 |
A | ASP145 |
D | GLU246 |
A | GLY100 |
site_id | AC3 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE PGE A 422 |
Chain | Residue |
A | LEU71 |
A | ASN160 |
A | LEU161 |
A | PHE163 |
A | THR164 |
A | PRO167 |
A | PHE168 |
A | ARG185 |
A | GLU188 |
A | THR189 |
A | GLY192 |
site_id | AC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 B 420 |
Chain | Residue |
B | TYR367 |
B | ASN368 |
B | ARG369 |
B | ILE387 |
B | HIS388 |
B | GLY389 |
B | SER390 |
C | PHE46 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 B 421 |
Chain | Residue |
B | GLY100 |
B | ARG101 |
B | GLY142 |
B | LEU143 |
B | THR144 |
B | ASP145 |
G | GLU246 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 C 420 |
Chain | Residue |
C | TYR367 |
C | ASN368 |
C | ARG369 |
C | ILE387 |
C | HIS388 |
C | GLY389 |
C | SER390 |
site_id | AC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 C 421 |
Chain | Residue |
C | GLY100 |
C | ARG101 |
C | LEU143 |
C | THR144 |
C | ASP145 |
F | GLU246 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 D 420 |
Chain | Residue |
D | TYR367 |
D | ASN368 |
D | ARG369 |
D | ILE387 |
D | HIS388 |
D | GLY389 |
D | SER390 |
E | PHE46 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 D 421 |
Chain | Residue |
A | GLU246 |
D | GLY100 |
D | ARG101 |
D | GLY142 |
D | LEU143 |
D | THR144 |
D | ASP145 |
site_id | BC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 E 420 |
Chain | Residue |
D | PHE46 |
E | TYR367 |
E | ASN368 |
E | ARG369 |
E | ILE387 |
E | HIS388 |
E | GLY389 |
E | SER390 |
site_id | BC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 E 421 |
Chain | Residue |
E | GLY100 |
E | ARG101 |
E | GLY142 |
E | LEU143 |
E | THR144 |
E | ASP145 |
H | GLU246 |
site_id | BC3 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 F 420 |
Chain | Residue |
F | TYR367 |
F | ASN368 |
F | ARG369 |
F | ILE387 |
F | HIS388 |
F | GLY389 |
F | SER390 |
F | HOH2056 |
site_id | BC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 F 421 |
Chain | Residue |
C | GLU246 |
F | GLY100 |
F | ARG101 |
F | GLY142 |
F | LEU143 |
F | THR144 |
F | ASP145 |
site_id | BC5 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE PG4 F 422 |
Chain | Residue |
F | ASP43 |
F | ILE44 |
F | PRO45 |
F | PHE46 |
F | LEU47 |
F | ARG394 |
F | HOH2062 |
G | ARG347 |
G | ASN351 |
G | ARG369 |
G | THR371 |
G | VAL393 |
G | ARG396 |
F | GLU29 |
site_id | BC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PGE F 423 |
Chain | Residue |
F | ALA96 |
F | ASN97 |
F | ALA154 |
F | ASP156 |
F | PRO157 |
F | THR184 |
F | ARG187 |
site_id | BC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 G 420 |
Chain | Residue |
F | HOH2014 |
G | TYR367 |
G | ASN368 |
G | ARG369 |
G | ILE387 |
G | HIS388 |
G | GLY389 |
G | SER390 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 G 421 |
Chain | Residue |
B | GLU246 |
G | GLY100 |
G | ARG101 |
G | GLY142 |
G | LEU143 |
G | THR144 |
G | ASP145 |
site_id | BC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 H 420 |
Chain | Residue |
A | HOH2014 |
H | TYR367 |
H | ASN368 |
H | ARG369 |
H | ILE387 |
H | HIS388 |
H | GLY389 |
H | SER390 |
site_id | CC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 H 421 |
Chain | Residue |
E | GLU246 |
H | GLY100 |
H | ARG101 |
H | GLY142 |
H | LEU143 |
H | THR144 |
H | ASP145 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | ACT_SITE: Amidino-cysteine intermediate => ECO:0000250 |
Chain | Residue | Details |
A | CYS401 | |
B | CYS401 | |
C | CYS401 | |
D | CYS401 | |
E | CYS401 | |
F | CYS401 | |
G | CYS401 | |
H | CYS401 |