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4BGD

Crystal structure of Brr2 in complex with the Jab1/MPN domain of Prp8

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0005524molecular_functionATP binding
C0000398biological_processmRNA splicing, via spliceosome
C0005681cellular_componentspliceosomal complex
C0008233molecular_functionpeptidase activity
C0008237molecular_functionmetallopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ADP A 3164
ChainResidue
APHE1345
AGLY1375
ALYS1376
ATHR1377
AHOH3007
AHOH3009
AMG3165
ATHR1347
APHE1348
AASN1349
AGLN1352
AGLY1371
ALYS1372
AGLY1373
ATHR1374

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 3165
ChainResidue
AHOH3007
AHOH3008
AHOH3009
AHOH3011
AHOH3012
AADP3164

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PE5 A 3166
ChainResidue
AASP474
ATYR677
ALEU691
APHE692
ATYR693

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues184
DetailsDomain: {"description":"Helicase ATP-binding 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues203
DetailsDomain: {"description":"Helicase C-terminal","evidences":[{"source":"PROSITE-ProRule","id":"PRU00542","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues310
DetailsDomain: {"description":"SEC63 1"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues176
DetailsDomain: {"description":"Helicase ATP-binding 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues314
DetailsDomain: {"description":"SEC63 2"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues3
DetailsMotif: {"description":"DEIH box"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues3
DetailsMotif: {"description":"DDAH box"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues129
DetailsDomain: {"description":"MPN","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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