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3W68

Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(4,5)-bisphosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0001890biological_processplacenta development
A0001892biological_processembryonic placenta development
A0005546molecular_functionphosphatidylinositol-4,5-bisphosphate binding
A0005737cellular_componentcytoplasm
A0005770cellular_componentlate endosome
A0008289molecular_functionlipid binding
A0008431molecular_functionvitamin E binding
A0009268biological_processresponse to pH
A0009636biological_processresponse to toxic substance
A0016020cellular_componentmembrane
A0019842molecular_functionvitamin binding
A0042360biological_processvitamin E metabolic process
A0043325molecular_functionphosphatidylinositol-3,4-bisphosphate binding
A0051180biological_processvitamin transport
A0051452biological_processintracellular pH reduction
A0090212biological_processnegative regulation of establishment of blood-brain barrier
A0120009biological_processintermembrane lipid transfer
A0120013molecular_functionlipid transfer activity
A1900223biological_processpositive regulation of amyloid-beta clearance
A1902936molecular_functionphosphatidylinositol bisphosphate binding
A1904036biological_processnegative regulation of epithelial cell apoptotic process
B0001890biological_processplacenta development
B0001892biological_processembryonic placenta development
B0005546molecular_functionphosphatidylinositol-4,5-bisphosphate binding
B0005737cellular_componentcytoplasm
B0005770cellular_componentlate endosome
B0008289molecular_functionlipid binding
B0008431molecular_functionvitamin E binding
B0009268biological_processresponse to pH
B0009636biological_processresponse to toxic substance
B0016020cellular_componentmembrane
B0019842molecular_functionvitamin binding
B0042360biological_processvitamin E metabolic process
B0043325molecular_functionphosphatidylinositol-3,4-bisphosphate binding
B0051180biological_processvitamin transport
B0051452biological_processintracellular pH reduction
B0090212biological_processnegative regulation of establishment of blood-brain barrier
B0120009biological_processintermembrane lipid transfer
B0120013molecular_functionlipid transfer activity
B1900223biological_processpositive regulation of amyloid-beta clearance
B1902936molecular_functionphosphatidylinositol bisphosphate binding
B1904036biological_processnegative regulation of epithelial cell apoptotic process
C0001890biological_processplacenta development
C0001892biological_processembryonic placenta development
C0005546molecular_functionphosphatidylinositol-4,5-bisphosphate binding
C0005737cellular_componentcytoplasm
C0005770cellular_componentlate endosome
C0008289molecular_functionlipid binding
C0008431molecular_functionvitamin E binding
C0009268biological_processresponse to pH
C0009636biological_processresponse to toxic substance
C0016020cellular_componentmembrane
C0019842molecular_functionvitamin binding
C0042360biological_processvitamin E metabolic process
C0043325molecular_functionphosphatidylinositol-3,4-bisphosphate binding
C0051180biological_processvitamin transport
C0051452biological_processintracellular pH reduction
C0090212biological_processnegative regulation of establishment of blood-brain barrier
C0120009biological_processintermembrane lipid transfer
C0120013molecular_functionlipid transfer activity
C1900223biological_processpositive regulation of amyloid-beta clearance
C1902936molecular_functionphosphatidylinositol bisphosphate binding
C1904036biological_processnegative regulation of epithelial cell apoptotic process
D0001890biological_processplacenta development
D0001892biological_processembryonic placenta development
D0005546molecular_functionphosphatidylinositol-4,5-bisphosphate binding
D0005737cellular_componentcytoplasm
D0005770cellular_componentlate endosome
D0008289molecular_functionlipid binding
D0008431molecular_functionvitamin E binding
D0009268biological_processresponse to pH
D0009636biological_processresponse to toxic substance
D0016020cellular_componentmembrane
D0019842molecular_functionvitamin binding
D0042360biological_processvitamin E metabolic process
D0043325molecular_functionphosphatidylinositol-3,4-bisphosphate binding
D0051180biological_processvitamin transport
D0051452biological_processintracellular pH reduction
D0090212biological_processnegative regulation of establishment of blood-brain barrier
D0120009biological_processintermembrane lipid transfer
D0120013molecular_functionlipid transfer activity
D1900223biological_processpositive regulation of amyloid-beta clearance
D1902936molecular_functionphosphatidylinositol bisphosphate binding
D1904036biological_processnegative regulation of epithelial cell apoptotic process
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE VIV A 301
ChainResidue
AALA129
AHOH419
ASER136
ALEU137
ASER140
APHE158
AVAL182
ALEU183
APHE187
AHOH402

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE 4PT A 302
ChainResidue
ASER208
ALYS211
ALYS219
BTHR172

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE 4PT A 303
ChainResidue
ALYS190
AARG192
ATHR215
ALYS217
AILE218
AARG221

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE VIV B 301
ChainResidue
BSER136
BLEU137
BSER140
BPHE158
BPHE187
BHOH401
BHOH409

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PBU B 302
ChainResidue
AALA168
AILE171
ATHR172
APRO173
BSER208
BMET209
BLYS211
BHOH433
BHOH455
BHOH458
BHOH474

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE 4PT B 303
ChainResidue
BLYS190
BARG192
BTHR215
BLYS217
BILE218
BARG221

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE VIV C 301
ChainResidue
CSER136
CLEU137
CSER140
CPHE158
CVAL182
CPHE187
CVAL191
CHOH402
CHOH411
CHOH417

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 C 302
ChainResidue
CLYS217
CPO4303

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 C 303
ChainResidue
CARG221
CPO4302

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PO4 C 304
ChainResidue
DPO4302

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE VIV D 301
ChainResidue
DALA129
DSER136
DLEU137
DSER140
DPHE158
DVAL182
DPHE187
DHOH401

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 D 302
ChainResidue
CPO4304
DARG221

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:23599266, ECO:0007744|PDB:3W67
ChainResidueDetails
DASP185
DLYS190
DLYS217
DARG221
AASP185
ALYS190
ALYS217
AARG221
BASP185
BLYS190
BLYS217
BARG221
CASP185
CLYS190
CLYS217
CARG221

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:23599266, ECO:0007744|PDB:3W68
ChainResidueDetails
CPHE187
CSER208
DPHE187
DSER208
APHE187
ASER208
BPHE187
BSER208

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PDB entries from 2024-04-17

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