Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3UMI

X-ray structure of the E2 domain of the human amyloid precursor protein (APP) in complex with zinc

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 601
ChainResidue
ACD6
AGLU362
AGLU365
AHOH767

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1
ChainResidue
AHOH79
AHIS382
AHIS432
AHIS436

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD A 2
ChainResidue
AGLU387
AASN391
AASP429
AHIS458
AHOH33

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CD A 3
ChainResidue
AASP444
AHOH732

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 4
ChainResidue
AGLU399
AHIS439
AHOH747
AHOH748

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 5
ChainResidue
AHIS327
AGLU368
AASP392
AHOH711

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CD A 6
ChainResidue
AGLU362
AGLU365
AACT601

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CD A 7
ChainResidue
AGLU329
AGLN484
AASP488

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CD A 8
ChainResidue
AHIS359

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CD A 9
ChainResidue
AGLU321
AASN400

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues63
DetailsRegion: {"description":"Heparin-binding"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues17
DetailsRegion: {"description":"Collagen-binding","evidences":[{"source":"PubMed","id":"8576160","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; by FAM20C","evidences":[{"source":"PubMed","id":"26091039","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"26091039","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"16335952","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon