3UBT
Crystal Structure of C71S Mutant of DNA Cytosine-5 Methyltransferase M.HaeIII Bound to DNA
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003886 | molecular_function | DNA (cytosine-5-)-methyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0008168 | molecular_function | methyltransferase activity |
A | 0009307 | biological_process | DNA restriction-modification system |
A | 0032259 | biological_process | methylation |
B | 0003677 | molecular_function | DNA binding |
B | 0003886 | molecular_function | DNA (cytosine-5-)-methyltransferase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0008168 | molecular_function | methyltransferase activity |
B | 0009307 | biological_process | DNA restriction-modification system |
B | 0032259 | biological_process | methylation |
Y | 0003677 | molecular_function | DNA binding |
Y | 0003886 | molecular_function | DNA (cytosine-5-)-methyltransferase activity |
Y | 0005524 | molecular_function | ATP binding |
Y | 0008168 | molecular_function | methyltransferase activity |
Y | 0009307 | biological_process | DNA restriction-modification system |
Y | 0032259 | biological_process | methylation |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL Y 332 |
Chain | Residue |
H | DC11 |
Y | SER241 |
site_id | AC2 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE ATP Y 333 |
Chain | Residue |
Y | HOH359 |
Y | HOH368 |
Y | HOH461 |
Y | HOH491 |
Y | HOH501 |
A | SER258 |
A | LYS259 |
Y | GLU29 |
Y | TYR30 |
Y | ASP50 |
Y | ILE51 |
Y | LEU90 |
site_id | AC3 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE ATP Y 334 |
Chain | Residue |
B | GLU29 |
B | TYR30 |
B | ASP50 |
B | ILE51 |
B | PRO70 |
B | LEU90 |
B | LYS302 |
Y | SER258 |
Y | LYS259 |
Y | ASN260 |
Y | HOH344 |
Y | HOH424 |
Y | HOH463 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE 2PE Y 335 |
Chain | Residue |
B | PRO192 |
B | GLN250 |
Y | LYS182 |
Y | TRP186 |
Y | TRP231 |
Y | ASN232 |
site_id | AC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL A 332 |
Chain | Residue |
A | SER241 |
F | DC11 |
site_id | AC6 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE ATP A 333 |
Chain | Residue |
A | GLU29 |
A | TYR30 |
A | ASP50 |
A | ILE51 |
A | ASN306 |
A | HOH361 |
A | HOH457 |
A | HOH524 |
A | HOH565 |
B | LYS259 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE 2PE A 334 |
Chain | Residue |
A | LYS182 |
A | TRP186 |
Y | PRO192 |
Y | PRO194 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL B 332 |
Chain | Residue |
B | SER241 |
C | DC11 |
Y | HOH479 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE 2PE B 333 |
Chain | Residue |
A | PRO194 |
A | ALA195 |
B | LYS182 |
B | TRP186 |
B | TRP231 |
Functional Information from PROSITE/UniProt
site_id | PS00095 |
Number of Residues | 19 |
Details | C5_MTASE_2 C-5 cytosine-specific DNA methylases C-terminal signature. KmiGNAVpVnLayeIaktI |
Chain | Residue | Details |
Y | LYS302-ILE320 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 3 |
Details | ACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01016, ECO:0000255|PROSITE-ProRule:PRU10018, ECO:0000269|PubMed:1932026 |
Chain | Residue | Details |
Y | SER71 | |
A | SER71 | |
B | SER71 |
site_id | SWS_FT_FI2 |
Number of Residues | 9 |
Details | BINDING: BINDING => ECO:0007744|PDB:3UBT |
Chain | Residue | Details |
Y | GLU29 | |
Y | ASP50 | |
Y | ASN260 | |
A | GLU29 | |
A | ASP50 | |
A | ASN260 | |
B | GLU29 | |
B | ASP50 | |
B | ASN260 |