3UBT
Crystal Structure of C71S Mutant of DNA Cytosine-5 Methyltransferase M.HaeIII Bound to DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Collection date | 2008-11-13 |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.564, 129.588, 132.381 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 16.981 - 2.502 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.22120 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.642 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.6.4_486) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 17.000 | 17.000 | 2.600 |
High resolution limit [Å] | 2.500 | 5.340 | 2.500 |
Rmerge | 0.122 | 0.068 | 0.370 |
Number of reflections | 31721 | 3346 | 2679 |
<I/σ(I)> | 7.93 | 11.05 | 3.41 |
Completeness [%] | 90.4 | 87.5 | 70.4 |
Redundancy | 3.4 | 3.19 | 2.46 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 26-27% (v/v) pentaerythritol ethoxylate (15/4 EO/OH), 100 mM ammonium sulfate, 50 mM Bis-Tris pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |