3U28
Crystal structure of a Cbf5-Nop10-Gar1 complex from Saccharomyces cerevisiae
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0001522 | biological_process | pseudouridine synthesis |
| A | 0003723 | molecular_function | RNA binding |
| A | 0006396 | biological_process | RNA processing |
| A | 0009451 | biological_process | RNA modification |
| A | 0009982 | molecular_function | pseudouridine synthase activity |
| B | 0000454 | biological_process | snoRNA guided rRNA pseudouridine synthesis |
| B | 0001522 | biological_process | pseudouridine synthesis |
| B | 0003723 | molecular_function | RNA binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005730 | cellular_component | nucleolus |
| B | 0005732 | cellular_component | sno(s)RNA-containing ribonucleoprotein complex |
| B | 0006364 | biological_process | rRNA processing |
| B | 0030515 | molecular_function | snoRNA binding |
| B | 0031118 | biological_process | rRNA pseudouridine synthesis |
| B | 0031120 | biological_process | snRNA pseudouridine synthesis |
| B | 0031429 | cellular_component | box H/ACA snoRNP complex |
| B | 0042254 | biological_process | ribosome biogenesis |
| B | 0070034 | molecular_function | telomerase RNA binding |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0001522 | biological_process | pseudouridine synthesis |
| C | 0042254 | biological_process | ribosome biogenesis |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 75 |
| Details | Domain: {"description":"PUA","evidences":[{"source":"PROSITE-ProRule","id":"PRU00161","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"UniProtKB","id":"P60340","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 7 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
