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3TM4

Crystal structure of Trm14 from Pyrococcus furiosus in complex with S-adenosylmethionine

Functional Information from GO Data
ChainGOidnamespacecontents
A0001510biological_processRNA methylation
A0003723molecular_functionRNA binding
A0005737cellular_componentcytoplasm
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0008168molecular_functionmethyltransferase activity
A0016423molecular_functiontRNA (guanine) methyltransferase activity
A0016740molecular_functiontransferase activity
A0030488biological_processtRNA methylation
A0032259biological_processmethylation
A0160117molecular_functiontRNA (guanine(6)-N2)-methyltransferase activity
B0001510biological_processRNA methylation
B0003723molecular_functionRNA binding
B0005737cellular_componentcytoplasm
B0006400biological_processtRNA modification
B0008033biological_processtRNA processing
B0008168molecular_functionmethyltransferase activity
B0016423molecular_functiontRNA (guanine) methyltransferase activity
B0016740molecular_functiontransferase activity
B0030488biological_processtRNA methylation
B0032259biological_processmethylation
B0160117molecular_functiontRNA (guanine(6)-N2)-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE SAM A 401
ChainResidue
AHIS198
ATHR230
AGLU248
ALYS249
ATYR250
AHIS253
AGLY275
AASP276
AALA277
AASN293
ALEU309
AALA200
AHOH635
AHIS201
ALEU202
APRO224
AMET225
ACYS226
AGLY227
ASER228

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE SAM B 401
ChainResidue
BHIS198
BALA200
BHIS201
BLEU202
BPRO224
BMET225
BCYS226
BGLY227
BSER228
BTHR230
BGLU248
BLYS249
BTYR250
BHIS253
BGLY275
BASP276
BALA277
BASN293
BHOH544
BHOH579

Functional Information from PROSITE/UniProt
site_idPS01261
Number of Residues12
DetailsUPF0020 Uncharacterized protein family UPF0020 signature. DPMCGSGtilIE
ChainResidueDetails
AASP223-GLU234

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:22362751, ECO:0007744|PDB:3TM4
ChainResidueDetails
AASN293
BHIS198
BSER228
BGLU248
BASP276
BASN293
AHIS198
ASER228
AGLU248
AASP276

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PDB entries from 2024-04-17

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