3T1I
Crystal Structure of Human Mre11: Understanding Tumorigenic Mutations
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004519 | molecular_function | endonuclease activity |
A | 0004520 | molecular_function | DNA endonuclease activity |
A | 0005634 | cellular_component | nucleus |
A | 0006302 | biological_process | double-strand break repair |
A | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0030145 | molecular_function | manganese ion binding |
A | 0030870 | cellular_component | Mre11 complex |
B | 0004519 | molecular_function | endonuclease activity |
B | 0004520 | molecular_function | DNA endonuclease activity |
B | 0005634 | cellular_component | nucleus |
B | 0006302 | biological_process | double-strand break repair |
B | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
B | 0016787 | molecular_function | hydrolase activity |
B | 0030145 | molecular_function | manganese ion binding |
B | 0030870 | cellular_component | Mre11 complex |
C | 0004519 | molecular_function | endonuclease activity |
C | 0004520 | molecular_function | DNA endonuclease activity |
C | 0005634 | cellular_component | nucleus |
C | 0006302 | biological_process | double-strand break repair |
C | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
C | 0016787 | molecular_function | hydrolase activity |
C | 0030145 | molecular_function | manganese ion binding |
C | 0030870 | cellular_component | Mre11 complex |
D | 0004519 | molecular_function | endonuclease activity |
D | 0004520 | molecular_function | DNA endonuclease activity |
D | 0005634 | cellular_component | nucleus |
D | 0006302 | biological_process | double-strand break repair |
D | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
D | 0016787 | molecular_function | hydrolase activity |
D | 0030145 | molecular_function | manganese ion binding |
D | 0030870 | cellular_component | Mre11 complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MN A 412 |
Chain | Residue |
A | ASP20 |
A | HIS22 |
A | ASP60 |
A | HIS247 |
A | MN413 |
A | HOH504 |
A | HOH519 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN A 413 |
Chain | Residue |
A | HIS217 |
A | HIS245 |
A | MN412 |
A | HOH519 |
A | ASP60 |
A | ASN128 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE DTT A 451 |
Chain | Residue |
A | ARG69 |
A | GOL453 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE DTT A 452 |
Chain | Residue |
A | LYS250 |
A | ILE251 |
A | ALA252 |
A | HIS283 |
A | LYS298 |
site_id | AC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL A 453 |
Chain | Residue |
A | CYS146 |
A | DTT451 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 454 |
Chain | Residue |
A | ASN128 |
A | HIS129 |
A | HOH518 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL A 455 |
Chain | Residue |
A | PHE37 |
A | HOH513 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 456 |
Chain | Residue |
A | PHE193 |
A | LYS196 |
A | PHE233 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 457 |
Chain | Residue |
A | HIS302 |
A | GLY353 |
A | HIS356 |
site_id | BC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL A 458 |
Chain | Residue |
A | GLN90 |
A | GLU92 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN B 412 |
Chain | Residue |
B | ASP20 |
B | HIS22 |
B | ASP60 |
B | HIS247 |
B | MN413 |
B | HOH507 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN B 413 |
Chain | Residue |
B | ASP60 |
B | ASN128 |
B | HIS217 |
B | HIS245 |
B | MN412 |
B | HOH507 |
site_id | BC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MN C 412 |
Chain | Residue |
C | ASP20 |
C | HIS22 |
C | ASP60 |
C | HIS247 |
C | MN413 |
C | HOH509 |
C | HOH520 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN C 413 |
Chain | Residue |
C | ASP60 |
C | ASN128 |
C | HIS217 |
C | HIS245 |
C | MN412 |
C | HOH509 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 451 |
Chain | Residue |
C | SER98 |
C | SER145 |
C | GLY148 |
C | VAL150 |
site_id | BC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 452 |
Chain | Residue |
C | PHE193 |
C | VAL194 |
C | LYS196 |
C | PHE233 |
site_id | BC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 453 |
Chain | Residue |
C | GLU278 |
C | ALA279 |
C | VAL280 |
C | GLN306 |
C | PHE307 |
site_id | BC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL C 454 |
Chain | Residue |
C | SER145 |
C | CYS146 |
C | HOH508 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 455 |
Chain | Residue |
C | MSE26 |
C | ARG32 |
C | THR272 |
C | LEU274 |
site_id | CC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 456 |
Chain | Residue |
C | ASN219 |
C | HIS245 |
C | GLU246 |
C | HIS247 |
C | HOH506 |
site_id | CC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MN D 412 |
Chain | Residue |
D | ASP20 |
D | HIS22 |
D | ASP60 |
D | HIS247 |
D | MN413 |
D | HOH504 |
D | HOH508 |
site_id | CC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MN D 413 |
Chain | Residue |
D | ASP20 |
D | ASP60 |
D | ASN128 |
D | HIS217 |
D | HIS245 |
D | MN412 |
D | HOH504 |
site_id | CC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE GOL D 451 |
Chain | Residue |
D | ASN128 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL D 452 |
Chain | Residue |
D | PRO166 |
D | LEU168 |
D | LYS204 |
site_id | CC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL D 453 |
Chain | Residue |
D | ASN34 |
D | LEU78 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor => ECO:0000250 |
Chain | Residue | Details |
A | HIS129 | |
B | HIS129 | |
C | HIS129 | |
D | HIS129 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q61216 |
Chain | Residue | Details |
A | SER2 | |
B | SER2 | |
C | SER2 | |
D | SER2 |
site_id | SWS_FT_FI3 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER275 | |
B | SER275 | |
C | SER275 | |
D | SER275 |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733 |
Chain | Residue | Details |
A | LYS255 | |
B | LYS255 | |
C | LYS255 | |
D | LYS255 |