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3QV7

Crystal structure of Leishmania mexicana pyruvate kinase(LmPYK)in complex with ponceau S and acid blue 25.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0003824molecular_functioncatalytic activity
A0004743molecular_functionpyruvate kinase activity
A0005524molecular_functionATP binding
A0006096biological_processglycolytic process
A0006950biological_processresponse to stress
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0030955molecular_functionpotassium ion binding
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0000287molecular_functionmagnesium ion binding
B0003824molecular_functioncatalytic activity
B0004743molecular_functionpyruvate kinase activity
B0005524molecular_functionATP binding
B0006096biological_processglycolytic process
B0006950biological_processresponse to stress
B0016301molecular_functionkinase activity
B0016740molecular_functiontransferase activity
B0030955molecular_functionpotassium ion binding
B0046872molecular_functionmetal ion binding
C0000166molecular_functionnucleotide binding
C0000287molecular_functionmagnesium ion binding
C0003824molecular_functioncatalytic activity
C0004743molecular_functionpyruvate kinase activity
C0005524molecular_functionATP binding
C0006096biological_processglycolytic process
C0006950biological_processresponse to stress
C0016301molecular_functionkinase activity
C0016740molecular_functiontransferase activity
C0030955molecular_functionpotassium ion binding
C0046872molecular_functionmetal ion binding
D0000166molecular_functionnucleotide binding
D0000287molecular_functionmagnesium ion binding
D0003824molecular_functioncatalytic activity
D0004743molecular_functionpyruvate kinase activity
D0005524molecular_functionATP binding
D0006096biological_processglycolytic process
D0006950biological_processresponse to stress
D0016301molecular_functionkinase activity
D0016740molecular_functiontransferase activity
D0030955molecular_functionpotassium ion binding
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 499
ChainResidue
DPRO87
DGLU88
DILE89
DVAL177
DASN178
DPHE212

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 D 500
ChainResidue
DARG404
DSER405
DALA481
DASP482
DSER400
DASN401
DTHR402

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K D 501
ChainResidue
DASN51
DSER53
DTHR84
DLYS238

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE K D 502
ChainResidue
DASP264

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE QV7 D 503
ChainResidue
DHIS54
DGLY55
DGLY55
DSER56
DSER56
DTYR59
DTYR59
DLYS335

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE QV7 A 499
ChainResidue
ASER53
AHIS54
AGLY55
ALYS335
AHOH655
BARG231
BARG404
BARG407
BQV7499
BQV8500

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 500
ChainResidue
ASER400
AASN401
ATHR402
AGLY403
AARG404
ASER405

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE K A 501
ChainResidue
AGLU240
AASP264

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 502
ChainResidue
AGLN354
ALEU357
AGLU359

site_idBC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE QV7 B 499
ChainResidue
ATHR26
APRO29
AASN51
AHIS54
AGLY55
ASER56
ATYR59
AALA334
ALYS335
AQV7499
BTHR402
BARG404
BASP482
BHIS483
BLYS486
BHOH514

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE QV8 B 500
ChainResidue
AQV7499
BARG231
BASP232
BTHR402
BARG424

site_idBC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE QV7 B 501
ChainResidue
ASER1
BSER1
BTYR360
BVAL361
BASN364
BQV7504
DASN364
DLYS368
DHOH507

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K B 503
ChainResidue
BGLN354
BLEU357
BGLU359
BHOH575

site_idBC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE QV7 B 504
ChainResidue
ASER1
ATYR360
AVAL361
AASN364
BSER1
BQV7501
CSER1
CVAL361
CLYS368

site_idBC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 C 499
ChainResidue
CSER400
CASN401
CTHR402
CARG404
CSER405
CALA481
CASP482

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K C 500
ChainResidue
CASP83
CTHR84
CLYS238
CHOH656
CASN51
CSER53

site_idBC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K C 501
ChainResidue
CGLN354
CLEU357
CGLU359

Functional Information from PROSITE/UniProt
site_idPS00110
Number of Residues13
DetailsPYRUVATE_KINASE Pyruvate kinase active site signature. ImIICKIENhQGV
ChainResidueDetails
DILE233-VAL245

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P14618","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsSite: {"description":"Transition state stabilizer"}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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