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3QIP

Structure of HIV-1 reverse transcriptase in complex with an RNase H inhibitor and nevirapine

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NVP A 561
ChainResidue
ALEU100
AHIS235
AHOH584
AHOH589
AHOH632
ALYS101
AVAL106
AVAL179
ATYR181
ATYR188
AGLY190
APHE227
ATRP229

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN A 562
ChainResidue
AASP443
AGLU478
AASP498
AP4Y900

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 563
ChainResidue
AASP443
AASP549
AHOH567
AHOH568
AP4Y900

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 564
ChainResidue
AARG211
AGLY436
AALA437
AGLU438
AASN460
AARG461
AHOH606
BALA288

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 565
ChainResidue
AGLN207
AGLY436
AARG461
AHOH810

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 566
ChainResidue
ASER515
AGLU516
AHOH742

site_idAC7
Number of Residues11
DetailsBINDING SITE FOR RESIDUE P4Y A 900
ChainResidue
AASP443
AARG448
AGLU478
AASP498
AALA538
AHIS539
AASP549
AMN562
AMN563
AHOH568
AHOH771

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 441
ChainResidue
BHOH557

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
BASP110
BASP185
BASP186

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
BTRP401
BTRP414

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
BPHE440
AASP549

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
ATRP401
ATRP414

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
APHE440

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
ALEU560

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

218500

PDB entries from 2024-04-17

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