Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001882 | molecular_function | nucleoside binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE SSJ A 1 |
Chain | Residue |
A | MG2 |
A | SER612 |
A | GLN613 |
A | ILE614 |
A | GLU615 |
A | HIS639 |
A | ARG659 |
A | ARG660 |
A | LYS663 |
A | THR664 |
A | PHE667 |
A | MG3 |
A | ASP785 |
B | DC111 |
B | DOC112 |
C | DA204 |
C | DG205 |
A | HOH33 |
A | HOH70 |
A | HOH126 |
A | ARG573 |
A | ARG587 |
A | ASP610 |
A | TYR611 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 2 |
Chain | Residue |
A | SSJ1 |
A | ASP610 |
A | TYR611 |
A | ASP785 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 3 |
Chain | Residue |
A | SSJ1 |
A | HOH33 |
A | ASP610 |
A | ASP785 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 4 |
Chain | Residue |
A | HOH163 |
A | LYS354 |
A | ASP355 |
A | ASN565 |
A | GLN566 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 5 |
Chain | Residue |
A | THR544 |
A | PRO579 |
A | ASN580 |
A | ASN583 |
C | HOH22 |
C | DC209 |
C | DC210 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 6 |
Chain | Residue |
A | GOL9 |
A | HOH157 |
A | ASN485 |
B | DG107 |
C | DG211 |
C | DT212 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PGE A 7 |
Chain | Residue |
A | GLU347 |
A | ARG349 |
A | GLY370 |
A | ASP371 |
site_id | AC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PGE A 8 |
Chain | Residue |
A | GLU745 |
A | ARG746 |
site_id | AC9 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 9 |
Chain | Residue |
A | GOL6 |
A | ASN485 |
A | SER486 |
A | ARG487 |
A | ASP488 |
B | HOH31 |
C | DG211 |
C | DT212 |
C | DG213 |
site_id | BC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PGE A 10 |
Chain | Residue |
A | HOH42 |
A | HOH131 |
A | HOH131 |
A | LYS767 |
A | LYS767 |
A | ARG771 |
A | VAL810 |
site_id | BC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PGE A 11 |
Chain | Residue |
A | ASP371 |
A | ARG435 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PGE A 12 |
Chain | Residue |
A | ARG313 |
A | GLU315 |
A | TRP318 |
A | LEU552 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PGE A 13 |
Chain | Residue |
A | GLY396 |
A | GLU397 |
A | GLU404 |
A | ARG411 |
site_id | BC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PGE A 14 |
Chain | Residue |
A | SER460 |
A | LYS542 |
site_id | BC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 15 |
Chain | Residue |
A | ARG425 |
A | TRP428 |
A | PHE724 |
site_id | BC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PGE A 16 |
Chain | Residue |
A | THR447 |
A | ARG778 |
site_id | BC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE PGE A 17 |
site_id | BC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PGE A 18 |
Chain | Residue |
A | HOH124 |
A | LYS508 |
A | THR509 |
A | GLU734 |
A | ALA735 |
site_id | CC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 1 |
Chain | Residue |
C | DC207 |
A | ARG728 |
A | MET747 |
C | PGE2 |
C | DG206 |
site_id | CC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PGE C 2 |
Chain | Residue |
C | GOL1 |
C | HOH31 |
C | DG205 |
C | DG206 |
C | DC207 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL |
Chain | Residue | Details |
A | ARG659-LEU678 | |