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3NDH

Restriction endonuclease in complex with substrate DNA

Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 217, CONFORMER A
ChainResidue
AASP82
AILE92
AHOH228
AHOH232
CDC7
CHOH17

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PGE A 219, CONFORMER A
ChainResidue
AASP73
ALYS84

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT A 220, CONFORMER A
ChainResidue
BARG208
AGLU38

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 217, CONFORMER A
ChainResidue
BASP82
BILE92
BHOH251
BHOH261
BHOH362
DDC7

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT C 12, CONFORMER A
ChainResidue
CDG11
CACT13
DDA3
DDT4
DHOH148

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT C 13, CONFORMER A
ChainResidue
CDG11
CACT12
CHOH366

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 217, CONFORMER B
ChainResidue
AASP82
AILE92
AHOH228
AHOH232
DDC7
CHOH17

site_idBC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PGE A 219, CONFORMER B
ChainResidue
ALYS84

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ACT A 220, CONFORMER B
ChainResidue
AGLU38

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 217, CONFORMER B
ChainResidue
BASP82
BILE92
BHOH251
BHOH261
BHOH362
CDC7

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT C 12, CONFORMER B
ChainResidue
DDC11
CDT3
CDA4
DHOH148

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 218
ChainResidue
AHOH248
AHOH338

site_idCC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 221
ChainResidue
AHIS-3
BHOH310
AHOH235
AHOH285
AHOH294
AHOH317

site_idCC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 222
ChainResidue
AHIS-4
AGLU67
AHOH373
AHOH432

site_idCC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 218
ChainResidue
BHOH357
BHOH282

site_idCC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PGE B 219
ChainResidue
BACT221

site_idCC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PGE B 220
ChainResidue
BGLU71
BASP73
BGLU78
BLYS84
BHOH278
BHOH312

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT B 221
ChainResidue
AARG208
BGLU38
BPGE219

221051

PDB entries from 2024-06-12

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