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3M59

SET7/9 Y245A in complex with TAF10-K189me2 peptide and AdoHcy

Functional Information from GO Data
ChainGOidnamespacecontents
A0005694cellular_componentchromosome
A0006355biological_processregulation of DNA-templated transcription
A0016279molecular_functionprotein-lysine N-methyltransferase activity
A0140945molecular_functionhistone H3K4 monomethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE SAH A 1
ChainResidue
AHOH33
AASN296
AHIS297
ATYR335
ATRP352
AGLU356
AHOH411
AHOH475
AHOH489
BMLY189
AHOH54
AHOH96
AALA226
AGLU228
AGLY264
AASN265
AHIS293
ALYS294

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CO A 367
ChainResidue
ASER285

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CO A 2
ChainResidue
AGLU351
ATRP352

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CO A 3
ChainResidue
AASN204
AALA324

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 368
ChainResidue
AHOH48
ATYR156
AARG179
APRO180
AGOL369

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 369
ChainResidue
AHOH38
ATYR156
AHIS181
APHE182
AGOL368

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 4
ChainResidue
AHOH58
AHOH69
AARG215

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 6
ChainResidue
AARG152
AMET173
ASER174
ATHR175
AHOH435

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues122
DetailsDomain: {"description":"SET","evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12514135","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12540855","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00190","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12514135","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12540855","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues5
DetailsSite: {"description":"Histone H3K4 binding","evidences":[{"source":"PubMed","id":"12540855","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 350
ChainResidueDetails
AALA245activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
AHIS293electrostatic stabiliser, hydrogen bond acceptor
AHIS297electrostatic stabiliser, hydrogen bond acceptor
ATYR305activator, electrostatic stabiliser, hydrogen bond acceptor
ATYR335activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

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PDB entries from 2025-12-24

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