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3KS6

Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.80 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0006629biological_processlipid metabolic process
A0008081molecular_functionphosphoric diester hydrolase activity
A0046872molecular_functionmetal ion binding
B0006629biological_processlipid metabolic process
B0008081molecular_functionphosphoric diester hydrolase activity
B0046872molecular_functionmetal ion binding
C0006629biological_processlipid metabolic process
C0008081molecular_functionphosphoric diester hydrolase activity
C0046872molecular_functionmetal ion binding
D0006629biological_processlipid metabolic process
D0008081molecular_functionphosphoric diester hydrolase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 251
ChainResidue
AGLU34
AASP36
AGLU104
AHOH256
AHOH290

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 252
ChainResidue
AMSE1
ATHR2
AARG244
BHOH342

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 253
ChainResidue
AHIS7
AARG8
AACT254
AHOH290
AHOH651

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 254
ChainResidue
ALYS106
APHE139
AACT253
AHOH288
AHOH359

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PEG A 255
ChainResidue
AALA178
AHIS179
DGLU174

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 251
ChainResidue
BGLU34
BASP36
BGLU104
BHOH263
BHOH265

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT B 252
ChainResidue
BHIS7
BARG8
BPHE139
BHOH265
BHOH525

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT B 253
ChainResidue
BASP145
BALA178
BHIS179
BARG244
BMSE245
BHOH1079
CGLU174

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG C 251
ChainResidue
CGLU34
CASP36
CGLU104
CHOH261
CHOH276

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT C 252
ChainResidue
CHIS7
CARG8
CHOH276
CHOH476

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG D 251
ChainResidue
DGLU34
DASP36
DGLU104
DHOH278
DHOH282

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT D 252
ChainResidue
DHIS7
DARG8
DHOH282
DHOH786

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG D 253
ChainResidue
AGLU174
DTRP148
DALA178
DHIS179
DSER180

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. FGCWAAH
ChainResidueDetails
APHE206-HIS212

221051

PDB entries from 2024-06-12

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