3KS6
Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.80 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-11 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837,0.97951,0.97870 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.427, 99.797, 134.656 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.828 - 1.800 |
R-factor | 0.168 |
Rwork | 0.166 |
R-free | 0.20500 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.438 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.828 | 29.830 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.086 | 0.042 | 0.662 |
Total number of observations | 4720 | 31619 | |
Number of reflections | 104654 | ||
<I/σ(I)> | 11.1 | 13.9 | 2 |
Completeness [%] | 100.0 | 97.8 | 100 |
Redundancy | 4.1 | 3.7 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | 35.0000% 2-propanol, 0.1M Acetate pH 4.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |