Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KS6

Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.80 A resolution

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2009-06-11
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.91837,0.97951,0.97870
Spacegroup nameP 21 21 21
Unit cell lengths83.427, 99.797, 134.656
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.828 - 1.800
R-factor0.168
Rwork0.166
R-free0.20500
Structure solution methodMAD
RMSD bond length0.017
RMSD bond angle1.438
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.2.5)
Phasing softwareSOLVE
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.82829.8301.850
High resolution limit [Å]1.8008.0501.800
Rmerge0.0860.0420.662
Total number of observations472031619
Number of reflections104654
<I/σ(I)>11.113.92
Completeness [%]100.097.8100
Redundancy4.13.74.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.527735.0000% 2-propanol, 0.1M Acetate pH 4.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon