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3JB9

Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution

Functional Information from GO Data
ChainGOidnamespacecontents
a0003676molecular_functionnucleic acid binding
a0003723molecular_functionRNA binding
A0000244biological_processspliceosomal tri-snRNP complex assembly
A0000393biological_processspliceosomal conformational changes to generate catalytic conformation
A0000398biological_processmRNA splicing, via spliceosome
A0000974cellular_componentPrp19 complex
A0003723molecular_functionRNA binding
A0004843molecular_functioncysteine-type deubiquitinase activity
A0005634cellular_componentnucleus
A0005681cellular_componentspliceosomal complex
A0005682cellular_componentU5 snRNP
A0006397biological_processmRNA processing
A0008233molecular_functionpeptidase activity
A0008237molecular_functionmetallopeptidase activity
A0008380biological_processRNA splicing
A0017070molecular_functionU6 snRNA binding
A0030619molecular_functionU1 snRNA binding
A0030620molecular_functionU2 snRNA binding
A0030623molecular_functionU5 snRNA binding
A0046540cellular_componentU4/U6 x U5 tri-snRNP complex
A0071013cellular_componentcatalytic step 2 spliceosome
A0071014cellular_componentpost-mRNA release spliceosomal complex
A0097157molecular_functionpre-mRNA intronic binding
b0000395biological_processmRNA 5'-splice site recognition
b0000398biological_processmRNA splicing, via spliceosome
b0003723molecular_functionRNA binding
b0005634cellular_componentnucleus
b0005681cellular_componentspliceosomal complex
b0005682cellular_componentU5 snRNP
b0005685cellular_componentU1 snRNP
b0005686cellular_componentU2 snRNP
b0005687cellular_componentU4 snRNP
b0005737cellular_componentcytoplasm
b0005829cellular_componentcytosol
b0006397biological_processmRNA processing
b0008380biological_processRNA splicing
b0032991cellular_componentprotein-containing complex
b0046540cellular_componentU4/U6 x U5 tri-snRNP complex
b0070990molecular_functionsnRNP binding
b0071004cellular_componentU2-type prespliceosome
b0071013cellular_componentcatalytic step 2 spliceosome
b0071014cellular_componentpost-mRNA release spliceosomal complex
B0000244biological_processspliceosomal tri-snRNP complex assembly
B0000398biological_processmRNA splicing, via spliceosome
B0000974cellular_componentPrp19 complex
B0003924molecular_functionGTPase activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005634cellular_componentnucleus
B0005681cellular_componentspliceosomal complex
B0005682cellular_componentU5 snRNP
B0005721cellular_componentpericentric heterochromatin
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006397biological_processmRNA processing
B0008380biological_processRNA splicing
B0030623molecular_functionU5 snRNA binding
B0031047biological_processregulatory ncRNA-mediated gene silencing
B0046540cellular_componentU4/U6 x U5 tri-snRNP complex
B0071007cellular_componentU2-type catalytic step 2 spliceosome
B0071014cellular_componentpost-mRNA release spliceosomal complex
B0140727biological_processsiRNA-mediated pericentric heterochromatin formation
c0000398biological_processmRNA splicing, via spliceosome
c0000974cellular_componentPrp19 complex
c0003674molecular_functionmolecular_function
c0005634cellular_componentnucleus
c0005681cellular_componentspliceosomal complex
c0005684cellular_componentU2-type spliceosomal complex
c0006397biological_processmRNA processing
c0008380biological_processRNA splicing
c0045292biological_processmRNA cis splicing, via spliceosome
c0071014cellular_componentpost-mRNA release spliceosomal complex
d0000413biological_processprotein peptidyl-prolyl isomerization
d0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
d0005515molecular_functionprotein binding
d0005634cellular_componentnucleus
d0005681cellular_componentspliceosomal complex
d0005829cellular_componentcytosol
d0006457biological_processprotein folding
d0045292biological_processmRNA cis splicing, via spliceosome
d0071013cellular_componentcatalytic step 2 spliceosome
d0071014cellular_componentpost-mRNA release spliceosomal complex
D0000243cellular_componentcommitment complex
D0000387biological_processspliceosomal snRNP assembly
D0000395biological_processmRNA 5'-splice site recognition
D0000398biological_processmRNA splicing, via spliceosome
D0003723molecular_functionRNA binding
D0003729molecular_functionmRNA binding
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005681cellular_componentspliceosomal complex
D0005682cellular_componentU5 snRNP
D0005685cellular_componentU1 snRNP
D0005686cellular_componentU2 snRNP
D0005687cellular_componentU4 snRNP
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006396biological_processRNA processing
D0006397biological_processmRNA processing
D0008380biological_processRNA splicing
D0034715cellular_componentpICln-Sm protein complex
D0034719cellular_componentSMN-Sm protein complex
D0046540cellular_componentU4/U6 x U5 tri-snRNP complex
D0071004cellular_componentU2-type prespliceosome
D0071011cellular_componentprecatalytic spliceosome
D0071013cellular_componentcatalytic step 2 spliceosome
D0071014cellular_componentpost-mRNA release spliceosomal complex
D0097525cellular_componentspliceosomal snRNP complex
D0097526cellular_componentspliceosomal tri-snRNP complex
e0000398biological_processmRNA splicing, via spliceosome
e0000974cellular_componentPrp19 complex
e0003674molecular_functionmolecular_function
e0005634cellular_componentnucleus
e0005681cellular_componentspliceosomal complex
e0005684cellular_componentU2-type spliceosomal complex
e0006397biological_processmRNA processing
e0008380biological_processRNA splicing
e0071014cellular_componentpost-mRNA release spliceosomal complex
E0000395biological_processmRNA 5'-splice site recognition
E0000398biological_processmRNA splicing, via spliceosome
E0003723molecular_functionRNA binding
E0005634cellular_componentnucleus
E0005681cellular_componentspliceosomal complex
E0005682cellular_componentU5 snRNP
E0005685cellular_componentU1 snRNP
E0005686cellular_componentU2 snRNP
E0005687cellular_componentU4 snRNP
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0006397biological_processmRNA processing
E0008380biological_processRNA splicing
E0032991cellular_componentprotein-containing complex
E0046540cellular_componentU4/U6 x U5 tri-snRNP complex
E0070990molecular_functionsnRNP binding
E0071004cellular_componentU2-type prespliceosome
E0071013cellular_componentcatalytic step 2 spliceosome
E0071014cellular_componentpost-mRNA release spliceosomal complex
f0000243cellular_componentcommitment complex
f0000387biological_processspliceosomal snRNP assembly
f0000395biological_processmRNA 5'-splice site recognition
f0000398biological_processmRNA splicing, via spliceosome
f0003723molecular_functionRNA binding
f0003729molecular_functionmRNA binding
f0005515molecular_functionprotein binding
f0005634cellular_componentnucleus
f0005681cellular_componentspliceosomal complex
f0005682cellular_componentU5 snRNP
f0005685cellular_componentU1 snRNP
f0005686cellular_componentU2 snRNP
f0005687cellular_componentU4 snRNP
f0005737cellular_componentcytoplasm
f0005829cellular_componentcytosol
f0006396biological_processRNA processing
f0006397biological_processmRNA processing
f0008380biological_processRNA splicing
f0034715cellular_componentpICln-Sm protein complex
f0034719cellular_componentSMN-Sm protein complex
f0046540cellular_componentU4/U6 x U5 tri-snRNP complex
f0071004cellular_componentU2-type prespliceosome
f0071011cellular_componentprecatalytic spliceosome
f0071013cellular_componentcatalytic step 2 spliceosome
f0071014cellular_componentpost-mRNA release spliceosomal complex
f0097525cellular_componentspliceosomal snRNP complex
f0097526cellular_componentspliceosomal tri-snRNP complex
F0000243cellular_componentcommitment complex
F0000387biological_processspliceosomal snRNP assembly
F0000395biological_processmRNA 5'-splice site recognition
F0000398biological_processmRNA splicing, via spliceosome
F0003723molecular_functionRNA binding
F0003729molecular_functionmRNA binding
F0005515molecular_functionprotein binding
F0005634cellular_componentnucleus
F0005681cellular_componentspliceosomal complex
F0005682cellular_componentU5 snRNP
F0005685cellular_componentU1 snRNP
F0005686cellular_componentU2 snRNP
F0005687cellular_componentU4 snRNP
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0006396biological_processRNA processing
F0006397biological_processmRNA processing
F0008380biological_processRNA splicing
F0034715cellular_componentpICln-Sm protein complex
F0034719cellular_componentSMN-Sm protein complex
F0046540cellular_componentU4/U6 x U5 tri-snRNP complex
F0071004cellular_componentU2-type prespliceosome
F0071011cellular_componentprecatalytic spliceosome
F0071013cellular_componentcatalytic step 2 spliceosome
F0071014cellular_componentpost-mRNA release spliceosomal complex
F0097525cellular_componentspliceosomal snRNP complex
F0097526cellular_componentspliceosomal tri-snRNP complex
g0000398biological_processmRNA splicing, via spliceosome
g0000974cellular_componentPrp19 complex
g0003729molecular_functionmRNA binding
g0005515molecular_functionprotein binding
g0005634cellular_componentnucleus
g0005681cellular_componentspliceosomal complex
g0006397biological_processmRNA processing
g0008380biological_processRNA splicing
g0045292biological_processmRNA cis splicing, via spliceosome
g0071013cellular_componentcatalytic step 2 spliceosome
g0071014cellular_componentpost-mRNA release spliceosomal complex
G0000387biological_processspliceosomal snRNP assembly
G0000395biological_processmRNA 5'-splice site recognition
G0000398biological_processmRNA splicing, via spliceosome
G0000974cellular_componentPrp19 complex
G0003723molecular_functionRNA binding
G0005634cellular_componentnucleus
G0005681cellular_componentspliceosomal complex
G0005682cellular_componentU5 snRNP
G0005685cellular_componentU1 snRNP
G0005686cellular_componentU2 snRNP
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0006397biological_processmRNA processing
G0008380biological_processRNA splicing
G0030532cellular_componentsmall nuclear ribonucleoprotein complex
G0032991cellular_componentprotein-containing complex
G0034715cellular_componentpICln-Sm protein complex
G0046540cellular_componentU4/U6 x U5 tri-snRNP complex
G0071004cellular_componentU2-type prespliceosome
G0071011cellular_componentprecatalytic spliceosome
G0071013cellular_componentcatalytic step 2 spliceosome
G0071014cellular_componentpost-mRNA release spliceosomal complex
G1990904cellular_componentribonucleoprotein complex
h0000398biological_processmRNA splicing, via spliceosome
h0000974cellular_componentPrp19 complex
h0003723molecular_functionRNA binding
h0005634cellular_componentnucleus
h0005681cellular_componentspliceosomal complex
h0006397biological_processmRNA processing
h0008380biological_processRNA splicing
h0045292biological_processmRNA cis splicing, via spliceosome
h0071013cellular_componentcatalytic step 2 spliceosome
h0071014cellular_componentpost-mRNA release spliceosomal complex
H0000387biological_processspliceosomal snRNP assembly
H0000395biological_processmRNA 5'-splice site recognition
H0000398biological_processmRNA splicing, via spliceosome
H0003723molecular_functionRNA binding
H0005634cellular_componentnucleus
H0005681cellular_componentspliceosomal complex
H0005682cellular_componentU5 snRNP
H0005685cellular_componentU1 snRNP
H0005686cellular_componentU2 snRNP
H0005687cellular_componentU4 snRNP
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0006397biological_processmRNA processing
H0008380biological_processRNA splicing
H0032991cellular_componentprotein-containing complex
H0034715cellular_componentpICln-Sm protein complex
H0046540cellular_componentU4/U6 x U5 tri-snRNP complex
H0071004cellular_componentU2-type prespliceosome
H0071011cellular_componentprecatalytic spliceosome
H0071014cellular_componentpost-mRNA release spliceosomal complex
i0000398biological_processmRNA splicing, via spliceosome
i0000974cellular_componentPrp19 complex
i0005515molecular_functionprotein binding
i0005634cellular_componentnucleus
i0005681cellular_componentspliceosomal complex
i0006397biological_processmRNA processing
i0008380biological_processRNA splicing
i0045292biological_processmRNA cis splicing, via spliceosome
i0071013cellular_componentcatalytic step 2 spliceosome
i0071014cellular_componentpost-mRNA release spliceosomal complex
I0000387biological_processspliceosomal snRNP assembly
I0000395biological_processmRNA 5'-splice site recognition
I0000398biological_processmRNA splicing, via spliceosome
I0003723molecular_functionRNA binding
I0005634cellular_componentnucleus
I0005681cellular_componentspliceosomal complex
I0005685cellular_componentU1 snRNP
I0005686cellular_componentU2 snRNP
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0006397biological_processmRNA processing
I0008380biological_processRNA splicing
I0034715cellular_componentpICln-Sm protein complex
I0046540cellular_componentU4/U6 x U5 tri-snRNP complex
I0071013cellular_componentcatalytic step 2 spliceosome
I0071014cellular_componentpost-mRNA release spliceosomal complex
I0120114cellular_componentSm-like protein family complex
j0000398biological_processmRNA splicing, via spliceosome
j0005634cellular_componentnucleus
j0005681cellular_componentspliceosomal complex
j0005686cellular_componentU2 snRNP
j0005829cellular_componentcytosol
j0006397biological_processmRNA processing
j0008380biological_processRNA splicing
j0030620molecular_functionU2 snRNA binding
j0071004cellular_componentU2-type prespliceosome
j0071014cellular_componentpost-mRNA release spliceosomal complex
J0000387biological_processspliceosomal snRNP assembly
J0000395biological_processmRNA 5'-splice site recognition
J0000398biological_processmRNA splicing, via spliceosome
J0003723molecular_functionRNA binding
J0005634cellular_componentnucleus
J0005681cellular_componentspliceosomal complex
J0005682cellular_componentU5 snRNP
J0005685cellular_componentU1 snRNP
J0005686cellular_componentU2 snRNP
J0005687cellular_componentU4 snRNP
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0006397biological_processmRNA processing
J0008380biological_processRNA splicing
J0032991cellular_componentprotein-containing complex
J0034719cellular_componentSMN-Sm protein complex
J0046540cellular_componentU4/U6 x U5 tri-snRNP complex
J0071004cellular_componentU2-type prespliceosome
J0071011cellular_componentprecatalytic spliceosome
J0071013cellular_componentcatalytic step 2 spliceosome
J0071014cellular_componentpost-mRNA release spliceosomal complex
J0097526cellular_componentspliceosomal tri-snRNP complex
k0003676molecular_functionnucleic acid binding
k0003723molecular_functionRNA binding
k0005634cellular_componentnucleus
k0005681cellular_componentspliceosomal complex
k0005686cellular_componentU2 snRNP
k0005829cellular_componentcytosol
k0006397biological_processmRNA processing
k0008380biological_processRNA splicing
k0030620molecular_functionU2 snRNA binding
k0045292biological_processmRNA cis splicing, via spliceosome
k0071004cellular_componentU2-type prespliceosome
k1990904cellular_componentribonucleoprotein complex
K0000398biological_processmRNA splicing, via spliceosome
l0000387biological_processspliceosomal snRNP assembly
l0000395biological_processmRNA 5'-splice site recognition
l0000398biological_processmRNA splicing, via spliceosome
l0000974cellular_componentPrp19 complex
l0003723molecular_functionRNA binding
l0005634cellular_componentnucleus
l0005681cellular_componentspliceosomal complex
l0005682cellular_componentU5 snRNP
l0005685cellular_componentU1 snRNP
l0005686cellular_componentU2 snRNP
l0005737cellular_componentcytoplasm
l0005829cellular_componentcytosol
l0006397biological_processmRNA processing
l0008380biological_processRNA splicing
l0030532cellular_componentsmall nuclear ribonucleoprotein complex
l0032991cellular_componentprotein-containing complex
l0034715cellular_componentpICln-Sm protein complex
l0046540cellular_componentU4/U6 x U5 tri-snRNP complex
l0071004cellular_componentU2-type prespliceosome
l0071011cellular_componentprecatalytic spliceosome
l0071013cellular_componentcatalytic step 2 spliceosome
l0071014cellular_componentpost-mRNA release spliceosomal complex
l1990904cellular_componentribonucleoprotein complex
L0000398biological_processmRNA splicing, via spliceosome
L0003674molecular_functionmolecular_function
L0005515molecular_functionprotein binding
L0005634cellular_componentnucleus
L0005681cellular_componentspliceosomal complex
L0005682cellular_componentU5 snRNP
L0006397biological_processmRNA processing
L0008380biological_processRNA splicing
L0045292biological_processmRNA cis splicing, via spliceosome
L0071013cellular_componentcatalytic step 2 spliceosome
L0071014cellular_componentpost-mRNA release spliceosomal complex
m0000387biological_processspliceosomal snRNP assembly
m0000395biological_processmRNA 5'-splice site recognition
m0000398biological_processmRNA splicing, via spliceosome
m0003723molecular_functionRNA binding
m0005634cellular_componentnucleus
m0005681cellular_componentspliceosomal complex
m0005682cellular_componentU5 snRNP
m0005685cellular_componentU1 snRNP
m0005686cellular_componentU2 snRNP
m0005687cellular_componentU4 snRNP
m0005737cellular_componentcytoplasm
m0005829cellular_componentcytosol
m0006397biological_processmRNA processing
m0008380biological_processRNA splicing
m0032991cellular_componentprotein-containing complex
m0034715cellular_componentpICln-Sm protein complex
m0046540cellular_componentU4/U6 x U5 tri-snRNP complex
m0071004cellular_componentU2-type prespliceosome
m0071011cellular_componentprecatalytic spliceosome
m0071014cellular_componentpost-mRNA release spliceosomal complex
M0000398biological_processmRNA splicing, via spliceosome
M0000974cellular_componentPrp19 complex
M0003723molecular_functionRNA binding
M0005515molecular_functionprotein binding
M0005634cellular_componentnucleus
M0005681cellular_componentspliceosomal complex
M0006397biological_processmRNA processing
M0008380biological_processRNA splicing
M0060090molecular_functionmolecular adaptor activity
M0071014cellular_componentpost-mRNA release spliceosomal complex
n0000387biological_processspliceosomal snRNP assembly
n0000395biological_processmRNA 5'-splice site recognition
n0000398biological_processmRNA splicing, via spliceosome
n0003723molecular_functionRNA binding
n0005634cellular_componentnucleus
n0005681cellular_componentspliceosomal complex
n0005685cellular_componentU1 snRNP
n0005686cellular_componentU2 snRNP
n0005737cellular_componentcytoplasm
n0005829cellular_componentcytosol
n0006397biological_processmRNA processing
n0008380biological_processRNA splicing
n0034715cellular_componentpICln-Sm protein complex
n0046540cellular_componentU4/U6 x U5 tri-snRNP complex
n0071013cellular_componentcatalytic step 2 spliceosome
n0071014cellular_componentpost-mRNA release spliceosomal complex
n0120114cellular_componentSm-like protein family complex
o0000387biological_processspliceosomal snRNP assembly
o0000395biological_processmRNA 5'-splice site recognition
o0000398biological_processmRNA splicing, via spliceosome
o0003723molecular_functionRNA binding
o0005634cellular_componentnucleus
o0005681cellular_componentspliceosomal complex
o0005682cellular_componentU5 snRNP
o0005685cellular_componentU1 snRNP
o0005686cellular_componentU2 snRNP
o0005687cellular_componentU4 snRNP
o0005737cellular_componentcytoplasm
o0005829cellular_componentcytosol
o0006397biological_processmRNA processing
o0008380biological_processRNA splicing
o0032991cellular_componentprotein-containing complex
o0034719cellular_componentSMN-Sm protein complex
o0046540cellular_componentU4/U6 x U5 tri-snRNP complex
o0071004cellular_componentU2-type prespliceosome
o0071011cellular_componentprecatalytic spliceosome
o0071013cellular_componentcatalytic step 2 spliceosome
o0071014cellular_componentpost-mRNA release spliceosomal complex
o0097526cellular_componentspliceosomal tri-snRNP complex
r0000398biological_processmRNA splicing, via spliceosome
r0006396biological_processRNA processing
R0000398biological_processmRNA splicing, via spliceosome
R0005634cellular_componentnucleus
R0006396biological_processRNA processing
S0000398biological_processmRNA splicing, via spliceosome
S0000974cellular_componentPrp19 complex
S0004842molecular_functionubiquitin-protein transferase activity
S0005515molecular_functionprotein binding
S0005634cellular_componentnucleus
S0005635cellular_componentnuclear envelope
S0005681cellular_componentspliceosomal complex
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0006281biological_processDNA repair
S0006397biological_processmRNA processing
S0008380biological_processRNA splicing
S0016567biological_processprotein ubiquitination
S0016740molecular_functiontransferase activity
S0061630molecular_functionubiquitin protein ligase activity
S0070534biological_processprotein K63-linked ubiquitination
S0071006cellular_componentU2-type catalytic step 1 spliceosome
S0071014cellular_componentpost-mRNA release spliceosomal complex
T0000398biological_processmRNA splicing, via spliceosome
T0000974cellular_componentPrp19 complex
T0004842molecular_functionubiquitin-protein transferase activity
T0005515molecular_functionprotein binding
T0005634cellular_componentnucleus
T0005635cellular_componentnuclear envelope
T0005681cellular_componentspliceosomal complex
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0006281biological_processDNA repair
T0006397biological_processmRNA processing
T0008380biological_processRNA splicing
T0016567biological_processprotein ubiquitination
T0016740molecular_functiontransferase activity
T0061630molecular_functionubiquitin protein ligase activity
T0070534biological_processprotein K63-linked ubiquitination
T0071006cellular_componentU2-type catalytic step 1 spliceosome
T0071014cellular_componentpost-mRNA release spliceosomal complex
U0000398biological_processmRNA splicing, via spliceosome
U0000974cellular_componentPrp19 complex
U0004842molecular_functionubiquitin-protein transferase activity
U0005515molecular_functionprotein binding
U0005634cellular_componentnucleus
U0005635cellular_componentnuclear envelope
U0005681cellular_componentspliceosomal complex
U0005737cellular_componentcytoplasm
U0005829cellular_componentcytosol
U0006281biological_processDNA repair
U0006397biological_processmRNA processing
U0008380biological_processRNA splicing
U0016567biological_processprotein ubiquitination
U0016740molecular_functiontransferase activity
U0061630molecular_functionubiquitin protein ligase activity
U0070534biological_processprotein K63-linked ubiquitination
U0071006cellular_componentU2-type catalytic step 1 spliceosome
U0071014cellular_componentpost-mRNA release spliceosomal complex
V0000398biological_processmRNA splicing, via spliceosome
V0000974cellular_componentPrp19 complex
V0004842molecular_functionubiquitin-protein transferase activity
V0005515molecular_functionprotein binding
V0005634cellular_componentnucleus
V0005635cellular_componentnuclear envelope
V0005681cellular_componentspliceosomal complex
V0005737cellular_componentcytoplasm
V0005829cellular_componentcytosol
V0006281biological_processDNA repair
V0006397biological_processmRNA processing
V0008380biological_processRNA splicing
V0016567biological_processprotein ubiquitination
V0016740molecular_functiontransferase activity
V0061630molecular_functionubiquitin protein ligase activity
V0070534biological_processprotein K63-linked ubiquitination
V0071006cellular_componentU2-type catalytic step 1 spliceosome
V0071014cellular_componentpost-mRNA release spliceosomal complex
W0000398biological_processmRNA splicing, via spliceosome
W0000974cellular_componentPrp19 complex
W0003677molecular_functionDNA binding
W0005515molecular_functionprotein binding
W0005634cellular_componentnucleus
W0005681cellular_componentspliceosomal complex
W0005829cellular_componentcytosol
W0006397biological_processmRNA processing
W0008380biological_processRNA splicing
W0045292biological_processmRNA cis splicing, via spliceosome
W0071014cellular_componentpost-mRNA release spliceosomal complex
W0140602cellular_componentnucleolar peripheral inclusion body
X0000398biological_processmRNA splicing, via spliceosome
X0000974cellular_componentPrp19 complex
X0003729molecular_functionmRNA binding
X0005515molecular_functionprotein binding
X0005634cellular_componentnucleus
X0005681cellular_componentspliceosomal complex
X0005684cellular_componentU2-type spliceosomal complex
X0006397biological_processmRNA processing
X0008380biological_processRNA splicing
X0045292biological_processmRNA cis splicing, via spliceosome
X0071013cellular_componentcatalytic step 2 spliceosome
X0071014cellular_componentpost-mRNA release spliceosomal complex
Y0003676molecular_functionnucleic acid binding
Y0003723molecular_functionRNA binding
Y0046872molecular_functionmetal ion binding
Z0000243cellular_componentcommitment complex
Z0000387biological_processspliceosomal snRNP assembly
Z0000395biological_processmRNA 5'-splice site recognition
Z0000398biological_processmRNA splicing, via spliceosome
Z0003723molecular_functionRNA binding
Z0003729molecular_functionmRNA binding
Z0005515molecular_functionprotein binding
Z0005634cellular_componentnucleus
Z0005681cellular_componentspliceosomal complex
Z0005682cellular_componentU5 snRNP
Z0005685cellular_componentU1 snRNP
Z0005686cellular_componentU2 snRNP
Z0005687cellular_componentU4 snRNP
Z0005737cellular_componentcytoplasm
Z0005829cellular_componentcytosol
Z0006396biological_processRNA processing
Z0006397biological_processmRNA processing
Z0008380biological_processRNA splicing
Z0034715cellular_componentpICln-Sm protein complex
Z0034719cellular_componentSMN-Sm protein complex
Z0046540cellular_componentU4/U6 x U5 tri-snRNP complex
Z0071004cellular_componentU2-type prespliceosome
Z0071011cellular_componentprecatalytic spliceosome
Z0071013cellular_componentcatalytic step 2 spliceosome
Z0071014cellular_componentpost-mRNA release spliceosomal complex
Z0097525cellular_componentspliceosomal snRNP complex
Z0097526cellular_componentspliceosomal tri-snRNP complex
Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YdgViFHRVIpdFViQGG
ChainResidueDetails
dTYR38-GLY55

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LTSVsdDcTMKVWDS
ChainResidueDetails
LLEU151-SER165
LVAL192-LEU206
KLEU262-MET276
KVAL304-LEU318
gLEU282-VAL296
SVAL391-LEU405

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues27
DetailsZN_FING: C3H1-type => ECO:0000255|PROSITE-ProRule:PRU00723
ChainResidueDetails
YASN111-PRO138
WTRP80-LEU102
MSER376

225158

PDB entries from 2024-09-18

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