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3HKY

HCV NS5B polymerase genotype 1b in complex with 1,5 benzodiazepine 6

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003968molecular_functionRNA-directed RNA polymerase activity
A0039694biological_processviral RNA genome replication
B0003723molecular_functionRNA binding
B0003968molecular_functionRNA-directed RNA polymerase activity
B0039694biological_processviral RNA genome replication
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE IX6 A 579
ChainResidue
APHE193
ASER556
ASO4581
AHOH587
AHOH588
AHOH595
AHOH737
AARG200
ACYS366
ASER367
AARG386
AMET414
AGLN446
ATYR448
AGLY449

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 580
ChainResidue
AARG505
AVAL530
AARG531
ATHR532

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 581
ChainResidue
ASER367
AARG386
ATHR390
AARG394
AIX6579
AHOH595
AHOH616
AHOH671

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 582
ChainResidue
AGLU440
ALEU457
AARG517
AHOH868

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 583
ChainResidue
APRO22
AILE23
AASN24
AARG401
AHOH925
BARG114

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 584
ChainResidue
AARG48
AARG158
ACYS223
AHOH791
AHOH897

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 585
ChainResidue
BLYS79

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 586
ChainResidue
AHIS475
ASER476
AHOH620

site_idAC9
Number of Residues14
DetailsBINDING SITE FOR RESIDUE IX6 B 579
ChainResidue
BPHE193
BCYS366
BSER367
BSER368
BMET414
BTYR415
BGLN446
BILE447
BTYR448
BGLY449
BSER556
BSO4580
BHOH760
BHOH798

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 580
ChainResidue
BSER367
BARG386
BTHR390
BARG394
BIX6579

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 582
ChainResidue
BGLY516
BARG517

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues236
DetailsDomain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P26663","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine; by host","evidences":[{"source":"UniProtKB","id":"P26662","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

248335

PDB entries from 2026-01-28

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