3HHA
Crystal structure of cathepsin L in complex with AZ12878478
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006508 | biological_process | proteolysis |
| A | 0008234 | molecular_function | cysteine-type peptidase activity |
| B | 0006508 | biological_process | proteolysis |
| B | 0008234 | molecular_function | cysteine-type peptidase activity |
| C | 0006508 | biological_process | proteolysis |
| C | 0008234 | molecular_function | cysteine-type peptidase activity |
| D | 0006508 | biological_process | proteolysis |
| D | 0008234 | molecular_function | cysteine-type peptidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE NOW A 301 |
| Chain | Residue |
| A | GLN19 |
| A | MET70 |
| A | ALA135 |
| A | MET161 |
| A | ASP162 |
| A | PG4221 |
| A | ACT222 |
| A | HOH746 |
| A | GLY23 |
| A | SER24 |
| A | CYS25 |
| A | TRP26 |
| A | GLY61 |
| A | GLY67 |
| A | GLY68 |
| A | LEU69 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE PG4 A 221 |
| Chain | Residue |
| A | GLN19 |
| A | GLY20 |
| A | GLN21 |
| A | CYS22 |
| A | GLY23 |
| A | TRP189 |
| A | ACT222 |
| A | NOW301 |
| A | HOH447 |
| C | GLU141 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT A 222 |
| Chain | Residue |
| A | ASN66 |
| A | ASP162 |
| A | PG4221 |
| A | NOW301 |
| A | HOH994 |
| site_id | AC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE NOW B 301 |
| Chain | Residue |
| B | GLN19 |
| B | GLY23 |
| B | SER24 |
| B | CYS25 |
| B | TRP26 |
| B | GLY61 |
| B | GLU63 |
| B | GLY67 |
| B | GLY68 |
| B | LEU69 |
| B | ALA135 |
| B | MET161 |
| B | ASP162 |
| B | PGE221 |
| B | HOH613 |
| B | HOH952 |
| B | HOH956 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE PGE B 221 |
| Chain | Residue |
| B | GLN19 |
| B | GLY20 |
| B | CYS22 |
| B | GLY23 |
| B | LEU144 |
| B | TRP189 |
| B | NOW301 |
| B | HOH440 |
| B | HOH882 |
| site_id | AC6 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE NOW C 301 |
| Chain | Residue |
| C | GLN19 |
| C | GLY23 |
| C | SER24 |
| C | CYS25 |
| C | TRP26 |
| C | GLY61 |
| C | GLY67 |
| C | GLY68 |
| C | LEU69 |
| C | ALA135 |
| C | MET161 |
| C | ASP162 |
| C | HOH988 |
| site_id | AC7 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE NOW D 301 |
| Chain | Residue |
| D | GLN19 |
| D | GLY23 |
| D | SER24 |
| D | CYS25 |
| D | TRP26 |
| D | GLY61 |
| D | GLY67 |
| D | GLY68 |
| D | LEU69 |
| D | ALA135 |
| D | MET161 |
| D | ASP162 |
| D | HOH989 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL D 221 |
| Chain | Residue |
| D | LYS17 |
| D | ASN18 |
| D | GLU86 |
Functional Information from PROSITE/UniProt
| site_id | PS00139 |
| Number of Residues | 12 |
| Details | THIOL_PROTEASE_CYS Eukaryotic thiol (cysteine) proteases cysteine active site. QGqCGSCWAfSA |
| Chain | Residue | Details |
| A | GLN19-ALA30 |
| site_id | PS00639 |
| Number of Residues | 11 |
| Details | THIOL_PROTEASE_HIS Eukaryotic thiol (cysteine) proteases histidine active site. MDHGVLVVGYG |
| Chain | Residue | Details |
| A | MET161-GLY171 |
| site_id | PS00640 |
| Number of Residues | 20 |
| Details | THIOL_PROTEASE_ASN Eukaryotic thiol (cysteine) proteases asparagine active site. YWLvKNSWgeeWGmgGYVkM |
| Chain | Residue | Details |
| A | TYR182-MET201 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Propeptide: {"featureId":"PRO_0000026246"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Active site: {"evidences":[{"source":"PubMed","id":"9468501","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | Active site: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 44 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"37990007","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"8HFV","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"12754519","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16335952","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19159218","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| A | ASN187 | |
| A | CYS25 | |
| A | HIS163 |
| site_id | CSA10 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| B | ASN187 | |
| B | GLN19 | |
| B | HIS163 |
| site_id | CSA11 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| C | ASN187 | |
| C | GLN19 | |
| C | HIS163 |
| site_id | CSA12 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| D | ASN187 | |
| D | GLN19 | |
| D | HIS163 |
| site_id | CSA2 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| B | ASN187 | |
| B | CYS25 | |
| B | HIS163 |
| site_id | CSA3 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| C | ASN187 | |
| C | CYS25 | |
| C | HIS163 |
| site_id | CSA4 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| D | ASN187 | |
| D | CYS25 | |
| D | HIS163 |
| site_id | CSA5 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| A | GLN19 | |
| A | CYS25 | |
| A | HIS163 |
| site_id | CSA6 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| B | GLN19 | |
| B | CYS25 | |
| B | HIS163 |
| site_id | CSA7 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| C | GLN19 | |
| C | CYS25 | |
| C | HIS163 |
| site_id | CSA8 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| D | GLN19 | |
| D | CYS25 | |
| D | HIS163 |
| site_id | CSA9 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1pad |
| Chain | Residue | Details |
| A | ASN187 | |
| A | GLN19 | |
| A | HIS163 |
