3HAX

Crystal structure of a substrate-bound Gar1-minus H/ACA RNP from Pyrococcus furiosus

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000495	biological_process	box H/ACA sno(s)RNA 3'-end processing
A	0001522	biological_process	pseudouridine synthesis
A	0003723	molecular_function	RNA binding
A	0005515	molecular_function	protein binding
A	0006396	biological_process	RNA processing
A	0008033	biological_process	tRNA processing
A	0009451	biological_process	RNA modification
A	0009982	molecular_function	pseudouridine synthase activity
A	0016853	molecular_function	isomerase activity
A	0031118	biological_process	rRNA pseudouridine synthesis
A	0031119	biological_process	tRNA pseudouridine synthesis
A	0031120	biological_process	snRNA pseudouridine synthesis
A	0160148	molecular_function	tRNA pseudouridine(55) synthase activity
A	1990481	biological_process	mRNA pseudouridine synthesis
C	0001522	biological_process	pseudouridine synthesis
C	0005515	molecular_function	protein binding
C	0006364	biological_process	rRNA processing
C	0030515	molecular_function	snoRNA binding
C	0042254	biological_process	ribosome biogenesis
C	1990904	cellular_component	ribonucleoprotein complex
D	0001682	biological_process	tRNA 5'-leader removal
D	0003723	molecular_function	RNA binding
D	0003735	molecular_function	structural constituent of ribosome
D	0004526	molecular_function	ribonuclease P activity
D	0005737	cellular_component	cytoplasm
D	0005840	cellular_component	ribosome
D	0006364	biological_process	rRNA processing
D	0006412	biological_process	translation
D	0008033	biological_process	tRNA processing
D	0019843	molecular_function	rRNA binding
D	0042254	biological_process	ribosome biogenesis
D	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE PGE A 401

Chain	Residue
A	GLU44
A	TRP230
A	LYS231
A	GLY234
D	ARG46
D	HOH521
E	G21
E	G22

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site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PGE A 402

Chain	Residue
A	TRP257
A	LYS279
A	LEU295
A	ASP297
C	PRO21
A	VAL21

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site_id	AC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE EDO A 403

Chain	Residue
A	GLU134

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site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ZN C 201

Chain	Residue
C	CYS8
C	CYS11
C	CYS20
C	CYS23

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site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE PG4 C 401

Chain	Residue
C	ARG34
D	GLU62
D	HIS66

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site_id	AC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE EDO D 401

Chain	Residue
D	GLY106
D	LYS107

---

site_id	AC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG E 200

Chain	Residue
E	HOH401
E	HOH402
E	HOH403
E	HOH404
E	HOH405
E	HOH406

---

site_id	AC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG E 201

Chain	Residue
D	ASP110
D	GLU113
E	HOH411
E	HOH412
E	HOH413
E	HOH414

---

site_id	AC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG E 202

Chain	Residue
C	GLU43
E	C37
E	HOH421
E	HOH422
E	HOH423
E	HOH424

---

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG E 203

Chain	Residue
E	HOH431
E	HOH432
E	HOH433

---

site_id	BC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG E 204

Chain	Residue
E	HOH441
E	HOH442
E	HOH443
E	HOH444

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Functional Information from PROSITE/UniProt

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeekeIPYiyVpSKkeLG

Chain	Residue	Details
D	CYS71-GLY88

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	ACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_01081

Chain	Residue	Details
A	ASP85

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Catalytic Information from CSA

site_id	CSA1
Number of Residues	2
Details	Annotated By Reference To The Literature 1ze1

Chain	Residue	Details
A	ASP85
A	TYR113

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