Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GYF

Human DHFR with Z-isomer in Orthorhombic lattice

Functional Information from GO Data
ChainGOidnamespacecontents
A0000900molecular_functionmRNA regulatory element binding translation repressor activity
A0003723molecular_functionRNA binding
A0003729molecular_functionmRNA binding
A0004146molecular_functiondihydrofolate reductase activity
A0005542molecular_functionfolic acid binding
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005829cellular_componentcytosol
A0006729biological_processtetrahydrobiopterin biosynthetic process
A0006730biological_processone-carbon metabolic process
A0008144molecular_functionobsolete drug binding
A0016491molecular_functionoxidoreductase activity
A0017148biological_processnegative regulation of translation
A0031103biological_processaxon regeneration
A0031427biological_processresponse to methotrexate
A0046452biological_processdihydrofolate metabolic process
A0046653biological_processtetrahydrofolate metabolic process
A0046654biological_processtetrahydrofolate biosynthetic process
A0046655biological_processfolic acid metabolic process
A0050661molecular_functionNADP binding
A0051000biological_processpositive regulation of nitric-oxide synthase activity
A0070402molecular_functionNADPH binding
A1990825molecular_functionsequence-specific mRNA binding
A2000121biological_processregulation of removal of superoxide radicals
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 51P A 187
ChainResidue
AILE7
AVAL115
ATYR121
ATHR136
ANDP188
AHOH215
AVAL8
AALA9
AGLU30
APHE31
APHE34
ATHR56
ASER59
AILE60

site_idAC2
Number of Residues32
DetailsBINDING SITE FOR RESIDUE NDP A 188
ChainResidue
AVAL8
AALA9
AILE16
AGLY17
ALYS18
AGLY20
AASP21
ALEU22
AGLY53
ALYS54
ALYS55
ATHR56
ASER59
ALEU75
ASER76
AARG77
AGLU78
AARG91
AVAL115
AGLY116
AGLY117
ASER118
ASER119
AVAL120
ATYR121
ATHR146
A51P187
AHOH208
AHOH215
AHOH232
AHOH255
AHOH286

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 189
ChainResidue
AARG28
ALYS68
AGLY69
AHOH229

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 190
ChainResidue
APRO66
AILE71
AASN72
AHIS87
ALEU153
AGLU154
AHOH199
AHOH250
AHOH254

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 191
ChainResidue
AASN13
APRO163
AGLY164
AHOH226
AHOH276

Functional Information from PROSITE/UniProt
site_idPS00075
Number of Residues24
DetailsDHFR_1 Dihydrofolate reductase (DHFR) domain signature. GIGkngdLPWpplrnEfryFqrmT
ChainResidueDetails
AGLY15-THR38

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:15039552, ECO:0000269|PubMed:16222560, ECO:0000269|PubMed:19478082
ChainResidueDetails
AALA9
AGLY15
ALYS54
ASER76
AGLY116

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000305|PubMed:2248959
ChainResidueDetails
AGLU30
AASN64
AARG70

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dhf
ChainResidueDetails
ALEU22
AGLU30

site_idMCSA1
Number of Residues2
DetailsM-CSA 490
ChainResidueDetails
ALEU22electrostatic stabiliser
AGLU30electrostatic stabiliser

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon