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3GDH

Methyltransferase domain of human Trimethylguanosine Synthase 1 (TGS1) bound to m7GTP and adenosyl-homocysteine (active form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0001510biological_processRNA methylation
A0008168molecular_functionmethyltransferase activity
A0036261biological_process7-methylguanosine cap hypermethylation
B0001510biological_processRNA methylation
B0008168molecular_functionmethyltransferase activity
B0036261biological_process7-methylguanosine cap hypermethylation
C0001510biological_processRNA methylation
C0008168molecular_functionmethyltransferase activity
C0036261biological_process7-methylguanosine cap hypermethylation
Functional Information from PDB Data
site_idAC1
Number of Residues23
DetailsBINDING SITE FOR RESIDUE MGP A 1
ChainResidue
AHOH2
ASER671
AVAL672
APRO674
ASER763
APRO764
ATRP766
AGLY768
ATYR771
AARG807
ALYS836
AHOH10
ATHR837
APGR855
AHOH856
AHOH857
AHOH214
AHOH223
AHOH262
AHOH312
ALYS646
ATYR647
APHE670

site_idAC2
Number of Residues25
DetailsBINDING SITE FOR RESIDUE SAH A 854
ChainResidue
AHOH5
AHOH26
AHOH169
AHOH170
AHOH241
AGLU667
ASER671
AVAL672
ATHR673
AALA697
APHE698
ACYS699
AGLY700
AVAL701
AGLY702
AGLY703
AASN704
AASP719
AILE720
ALYS724
AGLY746
AASP747
APHE748
ASER763
APRO765

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PGR A 855
ChainResidue
AMGP1
ATYR647
AGLN650
ALYS836

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PGR A 4
ChainResidue
AGLU733
AGLY736
AILE737
AALA738
AASP739

site_idAC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE MGP B 2
ChainResidue
BHOH67
BHOH96
BLYS646
BTYR647
BPHE670
BSER671
BVAL672
BPRO674
BSER763
BPRO764
BTRP766
BGLY768
BTYR771
BARG807
BLYS836
BTHR837
BPGR855

site_idAC6
Number of Residues22
DetailsBINDING SITE FOR RESIDUE SAH B 854
ChainResidue
BHOH65
BHOH66
BHOH99
BHOH284
BGLU667
BSER671
BTHR673
BALA697
BPHE698
BCYS699
BGLY700
BVAL701
BGLY702
BGLY703
BASN704
BASP719
BILE720
BLYS724
BASP747
BPHE748
BSER763
BPRO765

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PGR B 855
ChainResidue
BGLN650
BLYS836
BMGP2
BLYS646
BTYR647

site_idAC8
Number of Residues19
DetailsBINDING SITE FOR RESIDUE MGP C 3
ChainResidue
CHOH115
CHOH209
CLYS646
CTYR647
CPHE670
CSER671
CVAL672
CTHR673
CPRO674
CSER763
CPRO764
CTRP766
CGLY768
CTYR771
CARG807
CLYS834
CLYS836
CTHR837
CPGR855

site_idAC9
Number of Residues23
DetailsBINDING SITE FOR RESIDUE SAH C 854
ChainResidue
CHOH117
CHOH124
CGLU667
CSER671
CVAL672
CTHR673
CALA697
CPHE698
CCYS699
CGLY700
CVAL701
CGLY702
CGLY703
CASN704
CASP719
CILE720
CLYS724
CGLY746
CASP747
CPHE748
CLEU749
CSER763
CPRO765

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PGR C 855
ChainResidue
CMGP3
CTYR647
CGLN650
CLYS836

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PGO C 856
ChainResidue
CHOH254
CALA732
CGLU733
CGLY736
CILE737
CALA738
CASP739

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP719
BASP719
CASP719

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:19386620
ChainResidueDetails
ATRP766
BTRP766
CTRP766

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PDB entries from 2024-08-07

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