Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3G38

The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0008081molecular_functionphosphoric diester hydrolase activity
A0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
A0016787molecular_functionhydrolase activity
A0016829molecular_functionlyase activity
A0046872molecular_functionmetal ion binding
A0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 266
ChainResidue
AARG51
AHIS52
AVAL53
ATYR56
AGLU186

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 267
ChainResidue
AALA63
ALYS66

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 268
ChainResidue
ALEU257
ALEU258

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 269
ChainResidue
APHE59
APRO79
AHOH309

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 270
ChainResidue
AHIS18
AARG19
ASER198
AASP199

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 271
ChainResidue
ALYS235
AARG236
ATRP238
AGLU254

Functional Information from PROSITE/UniProt
site_idPS00726
Number of Residues10
DetailsAP_NUCLEASE_F1_1 AP endonucleases family 1 signature 1. PDILCLQEIK
ChainResidueDetails
APRO31-LYS40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:20434457
ChainResidueDetails
AASN151

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:20434457, ECO:0000269|Ref.7
ChainResidueDetails
AASN12
AGLU38

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:20434457
ChainResidueDetails
AASN151
AASN153
AHIS248

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon