3G38
The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-05-17 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.80150 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 79.960, 107.150, 44.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.130 - 3.040 |
R-factor | 0.259 |
Rwork | 0.256 |
R-free | 0.32800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDN ENTRY 3FZI |
RMSD bond length | 0.009 |
RMSD bond angle | 1.381 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.25) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.424 | 37.450 | 2.890 |
High resolution limit [Å] | 2.740 | 8.660 | 2.740 |
Rmerge | 0.117 | 0.050 | 0.471 |
Total number of observations | 80599 | 2536 | 11708 |
Number of reflections | 10553 | ||
<I/σ(I)> | 5.881 | 10.4 | 1.6 |
Completeness [%] | 100.0 | 98.7 | 100 |
Redundancy | 7.6 | 6.5 | 7.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | reservoir: 5% (w/v) PEG 4000, 50mM KCl, 100mM MES pH 5.6, 10mM MgCl2; complex solution: 230mM NaCl, 8mM HEPES-KOH pH 7.6, 2mM MgCl2, 3mM DTT, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | NaCl | ||
10 | 1 | 2 | H2O | ||
2 | 1 | 1 | HEPES-KOH | ||
3 | 1 | 1 | MgCl2 | ||
4 | 1 | 1 | DTT | ||
5 | 1 | 1 | H2O | ||
6 | 1 | 2 | PEG 4000 | ||
7 | 1 | 2 | KCl | ||
8 | 1 | 2 | MES | ||
9 | 1 | 2 | MgCl2 |