3FYP
Crystal structure of the quadruple mutant (N23C/C246S/D247E/P249A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008676 | molecular_function | 3-deoxy-8-phosphooctulonate synthase activity |
A | 0009058 | biological_process | biosynthetic process |
A | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
A | 0016740 | molecular_function | transferase activity |
A | 0019294 | biological_process | keto-3-deoxy-D-manno-octulosonic acid biosynthetic process |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0008676 | molecular_function | 3-deoxy-8-phosphooctulonate synthase activity |
B | 0009058 | biological_process | biosynthetic process |
B | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
B | 0016740 | molecular_function | transferase activity |
B | 0019294 | biological_process | keto-3-deoxy-D-manno-octulosonic acid biosynthetic process |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0008676 | molecular_function | 3-deoxy-8-phosphooctulonate synthase activity |
C | 0009058 | biological_process | biosynthetic process |
C | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
C | 0016740 | molecular_function | transferase activity |
C | 0019294 | biological_process | keto-3-deoxy-D-manno-octulosonic acid biosynthetic process |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0008676 | molecular_function | 3-deoxy-8-phosphooctulonate synthase activity |
D | 0009058 | biological_process | biosynthetic process |
D | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
D | 0016740 | molecular_function | transferase activity |
D | 0019294 | biological_process | keto-3-deoxy-D-manno-octulosonic acid biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL A 281 |
Chain | Residue |
A | HIS37 |
A | HIS255 |
A | LEU256 |
A | LEU257 |
A | GLU258 |
site_id | AC2 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL B 281 |
Chain | Residue |
B | LYS57 |
B | GLU236 |
B | SER237 |
B | HOH451 |
B | HOH766 |
B | GLY21 |
B | ILE22 |
B | CYS23 |
B | LYS52 |
site_id | AC3 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 2647 |
Chain | Residue |
B | LYS82 |
B | ALA103 |
B | GLU104 |
B | VAL105 |
B | ASP107 |
B | ASN130 |
B | HOH387 |
B | HOH799 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NA C 281 |
Chain | Residue |
B | HOH689 |
C | ALA103 |
C | CYS106 |
C | ASN130 |
C | HOH568 |
C | HOH569 |
site_id | AC5 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE PEP D 281 |
Chain | Residue |
D | LYS52 |
D | SER54 |
D | LYS57 |
D | GLN110 |
D | ALA113 |
D | LYS135 |
D | ARG165 |
D | HIS199 |
D | CL282 |
D | HOH541 |
D | HOH542 |
D | HOH555 |
D | HOH582 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CL D 282 |
Chain | Residue |
D | LYS52 |
D | GLN110 |
D | LYS135 |
D | HIS199 |
D | PHE234 |
D | PEP281 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA D 283 |
Chain | Residue |
B | SER168 |
D | SER168 |
D | GLY170 |
D | HOH454 |
D | HOH478 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MN D 284 |
Chain | Residue |
D | CYS23 |
D | HIS199 |
D | GLU236 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1q3n |
Chain | Residue | Details |
A | HIS199 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1q3n |
Chain | Residue | Details |
B | HIS199 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1q3n |
Chain | Residue | Details |
C | HIS199 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1q3n |
Chain | Residue | Details |
D | HIS199 |